ggKbase home page

SCNpilot_cont_300_bf_scaffold_817

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_817_1
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..315)
DNA (315bp) protein (105aa)
Cobyrinic acid ac-diamide synthase n=8 Tax=Bacteria RepID=A9BTU4_DELAS
Chromosome partitioning protein ParA
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACD27748.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia
SCNpilot_cont_300_bf_scaffold_817_2
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(566..1432)
DNA (867bp) protein (289aa)
RepA replication protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00035D78A4
RepA replication protein {ECO:0000313|EMBL:AKC78195.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestr
RepA replication protein
SCNpilot_cont_300_bf_scaffold_817_3
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1459..1740)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WFA6_PSEAI
Putative dna binding protein {ECO:0000313|EMBL:ENO87665.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis
hypothetical protein
SCNpilot_cont_300_bf_scaffold_817_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1824..2576)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C049_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL21965.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_817_5
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2912..3262)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C048_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL21964.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_817_6
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3575..3868
DNA (294bp) protein (98aa)
Helix-turn-helix domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C046_9BURK
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EHL21962.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
helix-turn-helix domain protein
SCNpilot_cont_300_bf_scaffold_817_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4249..4563)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=A9BR50_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX33108.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
SCNpilot_cont_300_bf_scaffold_817_8
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5412..6209
DNA (798bp) protein (266aa)
Uncharacterized protein (Fragment) n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8AVY4_PLESH
Uncharacterized protein {ECO:0000313|EMBL:KJE37262.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
SCNpilot_cont_300_bf_scaffold_817_9
unknown

Not on your lists

comp(6216..7022)
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_817_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7124..7450)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WWM2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42365.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
SCNpilot_cont_300_bf_scaffold_817_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7512..9539)
DNA (2028bp) protein (676aa)
ParB domain protein nuclease n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA05_ACISJ
ParB domain protein nuclease {ECO:0000313|EMBL:ABM43080.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (s
nuclease
SCNpilot_cont_300_bf_scaffold_817_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9618..10442)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAB6_DELAC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ46913.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
SCNpilot_cont_300_bf_scaffold_817_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10721..11230
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5W3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46614.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
SCNpilot_cont_300_bf_scaffold_817_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11280..11636)
DNA (357bp) protein (119aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=B2UA41_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EED68056.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
SCNpilot_cont_300_bf_scaffold_817_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12145..13305
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAT0_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD42367.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
SCNpilot_cont_300_bf_scaffold_817_16

Not on your lists

comp(13348..14316)
DNA (969bp) protein (323aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CVA7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD96990.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_300_bf_scaffold_817_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14742..16274
DNA (1533bp) protein (511aa)
Integrase catalytic region n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D093_VARPS rbh
Integrase catalytic region
Integrase catalytic region {ECO:0000313|EMBL:ACS22437.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxu
SCNpilot_cont_300_bf_scaffold_817_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16277..17029
DNA (753bp) protein (251aa)
IstB domain protein ATP-binding protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D092_VARPS rbh
IstB domain protein ATP-binding protein
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:ACS22436.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
SCNpilot_cont_300_bf_scaffold_817_19
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17316..18320
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI0003768F99 rbh
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AIJ26593.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanol
SCNpilot_cont_300_bf_scaffold_817_20
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18328..19362
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00036CE91F rbh
transcriptional regulator, CdaR
Transcriptional regulator, CdaR {ECO:0000313|EMBL:AIJ26594.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolic
SCNpilot_cont_300_bf_scaffold_817_21
Rhizobium sp. DS-S-51, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19564..20802
DNA (1239bp) protein (413aa)
4-chloro-3-hydroxybutyrate hydrolase n=1 Tax=Rhizobium sp. DS-S-51 RepID=B1B5J1_9RHIZ rbh
4-chloro-3-hydroxybutyrate hydrolase {ECO:0000313|EMBL:BAG12296.1}; TaxID=475206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
beta-lactamase
SCNpilot_cont_300_bf_scaffold_817_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21088..22536
DNA (1449bp) protein (483aa)
transposase n=1 Tax=Variovorax paradoxus RepID=UPI00036C86C3 rbh
Transposase {ECO:0000313|EMBL:EJL68523.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
transposase
SCNpilot_cont_300_bf_scaffold_817_23

Not on your lists

comp(22716..23048)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q83XV6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAP32753.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_300_bf_scaffold_817_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23109..23195)
DNA (87bp) protein (29aa)
Transposase, IS4 family {ECO:0000313|EMBL:AGU51318.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
Displaying 24 items

View Taxonomy