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SCNpilot_cont_300_bf_scaffold_1343

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1343_1
unknown

Not on your lists

comp(154..471)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1343_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(530..826)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPQ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89198.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
SCNpilot_cont_300_bf_scaffold_1343_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(875..1669)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F670E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF48161.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_300_bf_scaffold_1343_4
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1806..2138
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003693D81
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AIF48160.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_300_bf_scaffold_1343_5
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2144..2686)
DNA (543bp) protein (181aa)
Putative arsenate reductase arsC-like protein {ECO:0000313|EMBL:CCD99731.1}; EC=1.20.4.1 {ECO:0000313|EMBL:CCD99731.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
arsenate reductase subunit ArsC-like protein (EC:1.20.4.1)
Putative arsenate reductase arsC-like protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SZV4_9BRAD
SCNpilot_cont_300_bf_scaffold_1343_6
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2826..4058)
DNA (1233bp) protein (411aa)
Major facilitator transporter n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EDN3_9BURK
Major facilitator transporter {ECO:0000313|EMBL:EKZ97450.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus
major Facilitator Superfamily protein
SCNpilot_cont_300_bf_scaffold_1343_7
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4114..4815)
DNA (702bp) protein (234aa)
Cytochrome c biogenesis protein, transmembrane region n=2 Tax=Oligotropha carboxidovorans RepID=B6JKB7_OLICO
putative Cytochrome c biogenesis protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
cytochrome c biogenesis protein, transmembrane region
SCNpilot_cont_300_bf_scaffold_1343_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4818..5078)
DNA (261bp) protein (87aa)
Thioredoxin/glutaredoxin n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ3_NITHX
thioredoxin/glutaredoxin
Thioredoxin/glutaredoxin {ECO:0000313|EMBL:ABE65004.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburge
SCNpilot_cont_300_bf_scaffold_1343_9
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5090..5497)
DNA (408bp) protein (136aa)
Putative MerR family regulatory protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMA3_THIA3
putative MerR family regulatory protein
Putative MerR family regulatory protein {ECO:0000313|EMBL:CAZ89681.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydan
SCNpilot_cont_300_bf_scaffold_1343_10
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5550..5819)
DNA (270bp) protein (90aa)
Putative Thioredoxin/glutaredoxin n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMA4_THIA3
putative Thioredoxin/glutaredoxin Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
putative Thioredoxin/glutaredoxin
SCNpilot_cont_300_bf_scaffold_1343_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6132..6485)
DNA (354bp) protein (118aa)
Transcription regulator protein, arsenical resistance operon repressor n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSY4_9GAMM
Transcription regulator protein, arsenical resistance operon repressor {ECO:0000313|EMBL:EIL90325.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
putative transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1343_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6578..7651)
DNA (1074bp) protein (358aa)
Arsenical-resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLL0_9GAMM
arsenical-resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:AGG88558.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
SCNpilot_cont_300_bf_scaffold_1343_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7648..8166)
DNA (519bp) protein (173aa)
Protein-tyrosine-phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFN0_9GAMM
protein-tyrosine-phosphatase
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:AGG88862.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
SCNpilot_cont_300_bf_scaffold_1343_14
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8193..8510)
DNA (318bp) protein (106aa)
Transcriptional regulator, ArsR family n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QXG9_CHRSD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABE58839.1}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source
SCNpilot_cont_300_bf_scaffold_1343_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8563..9378
DNA (816bp) protein (272aa)
Arsenical resistance protein ArsH n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP05_9GAMM rbh
Arsenical resistance protein ArsH {ECO:0000313|EMBL:EIM01197.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
arsenical resistance protein ArsH
SCNpilot_cont_300_bf_scaffold_1343_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9375..9854
DNA (480bp) protein (160aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
Glutaredoxin-dependent arsenate reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDQ0_9GAMM
glutaredoxin-dependent arsenate reductase
SCNpilot_cont_300_bf_scaffold_1343_17
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9977..10723)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036ABE93 rbh
transposase-related ATP-binding subunit
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
SCNpilot_cont_300_bf_scaffold_1343_18
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10713..12248)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI00037517A9
Transposase {ECO:0000313|EMBL:KJZ08354.1}; TaxID=43658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas r
Integrase catalytic region protein
SCNpilot_cont_300_bf_scaffold_1343_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12488..12799)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa RepID=B3G2L1_PSEAI
Putative uncharacterized protein {ECO:0000313|EMBL:ACD39273.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1343_20
unknown

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12953..13822
DNA (870bp) protein (290aa)

This feature has no annotations

Displaying 20 items

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