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SCNpilot_cont_300_bf_scaffold_167

Search features with annotation key words

Displaying items 1-30 of 614 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_167_1
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

254..547
DNA (294bp) protein (98aa)
rho; transcription termination factor Rho (EC:3.6.1.-); K03628 transcription termination factor Rho Tax=CG_Mariprof_03
SCNpilot_cont_300_bf_scaffold_167_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1015..1965)
DNA (951bp) protein (317aa)
Hemolysin D n=1 Tax=Rhodanobacter denitrificans RepID=I4WL05_9GAMM
multidrug resistance efflux pump
Multidrug resistance efflux pump {ECO:0000313|EMBL:AGG88252.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter
SCNpilot_cont_300_bf_scaffold_167_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1962..2705)
DNA (744bp) protein (248aa)
ABC transporter-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WL04_9GAMM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AGG88253.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
SCNpilot_cont_300_bf_scaffold_167_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2711..3841)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WL03_9GAMM
ABC-type transport system, involved in lipoprotein release, permease component
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AGG88254.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xa
SCNpilot_cont_300_bf_scaffold_167_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3841..5274)
DNA (1434bp) protein (478aa)
Outer membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NC64_9GAMM rbh
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG88255.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
SCNpilot_cont_300_bf_scaffold_167_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5442..6875)
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WL01_9GAMM rbh
signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_167_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6872..7558)
DNA (687bp) protein (229aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WL00_9GAMM
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG88257.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacte
SCNpilot_cont_300_bf_scaffold_167_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7687..8229)
DNA (543bp) protein (181aa)
GCN5 family acetyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000346C136 rbh
acetyltransferase, ribosomal protein N-acetylase
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:AGG88261.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
SCNpilot_cont_300_bf_scaffold_167_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8248..8712)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5J9_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_167_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8822..10252
DNA (1431bp) protein (477aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5K1_9GAMM rbh
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:EIL94742.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
SCNpilot_cont_300_bf_scaffold_167_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10393..11097
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W528_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94569.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_167_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11370..12182
DNA (813bp) protein (271aa)
Cell wall-associated hydrolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJI7_9GAMM
Cell wall-associated hydrolase {ECO:0000313|EMBL:EIL87378.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
cell wall-associated hydrolase, invasion-associated protein
SCNpilot_cont_300_bf_scaffold_167_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12330..12992
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKA1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL87642.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
membrane protein
SCNpilot_cont_300_bf_scaffold_167_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13011..14378
DNA (1368bp) protein (456aa)
Amino acid transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM33_9GAMM rbh
Amino acid transporter {ECO:0000313|EMBL:EIM00525.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter th
gamma-aminobutyrate permease-like transporter
SCNpilot_cont_300_bf_scaffold_167_15
Acetobacter pasteurianus, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14526..14807
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B7430A
regulator protein FrmR
Regulator protein FrmR {ECO:0000313|EMBL:CCT60873.1}; TaxID=1266844 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter paste
SCNpilot_cont_300_bf_scaffold_167_16
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14854..15963
DNA (1110bp) protein (370aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthom
adhC; bifunctional alcohol dehydrogenase/S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.1 1.1.1.284)
S-(Hydroxymethyl)glutathione dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IPP8_9PROT
SCNpilot_cont_300_bf_scaffold_167_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16098..16934
DNA (837bp) protein (279aa)
S-formylglutathione hydrolase (EC:3.1.2.12)
S-formylglutathione hydrolase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TXV9_STEMA
S-formylglutathione hydrolase {ECO:0000313|EMBL:EMI48568.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas
SCNpilot_cont_300_bf_scaffold_167_18
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16997..17830)
DNA (834bp) protein (278aa)
short-chain dehydrogenase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00035D6D6D rbh
putative short-chain dehydrogenase
Putative short-chain dehydrogenase {ECO:0000313|EMBL:AJK50136.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkhol
SCNpilot_cont_300_bf_scaffold_167_19
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17991..18953
DNA (963bp) protein (321aa)
Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I0Y6_BORPD rbh
transcriptional regulator AraC family
Transcriptional regulator AraC family {ECO:0000313|EMBL:AJK50135.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
SCNpilot_cont_300_bf_scaffold_167_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18981..21830)
DNA (2850bp) protein (950aa)
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent hel
RNA polymerase-associated protein RapA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM34_9GAMM
DNA/RNA helicase, superfamily II, SNF2 family
SCNpilot_cont_300_bf_scaffold_167_21
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21980..25948)
DNA (3969bp) protein (1323aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030CE0F8 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF47399.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_167_22
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26167..26772)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00038255A5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47400.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_300_bf_scaffold_167_23
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26782..27909)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00035D12D2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47401.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_300_bf_scaffold_167_24
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27968..28429)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E78C3B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35933.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
SCNpilot_cont_300_bf_scaffold_167_25
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28426..29013)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037D7700
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47402.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_300_bf_scaffold_167_26
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29010..29462)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371B55A
type IV pilus biogenesis protein PilE Tax=CG_Rhodof_02
pilE3; type IV pilus biogenesis protein PilE
SCNpilot_cont_300_bf_scaffold_167_27
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29654..30424)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000361C43A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF48386.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_300_bf_scaffold_167_28
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30409..31095)
DNA (687bp) protein (229aa)
pkhd-type hydroxylase piuc; K07336 PKHD-type hydroxylase [EC:1.14.11.-] Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
PKHD-type hydroxylase Fraau_2200 n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L4M7_FRAAD rbh
putative iron-regulated protein
SCNpilot_cont_300_bf_scaffold_167_29
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31199..33496)
DNA (2298bp) protein (766aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031647FC rbh
TonB-dependent receptor {ECO:0000313|EMBL:AIF48388.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_167_30
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33796..34725
DNA (930bp) protein (310aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xan
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003128481 rbh
2-dehydropantoate 2-reductase
Displaying items 1-30 of 614 in total

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