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SCNpilot_cont_300_bf_scaffold_450

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_450_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61..549)
DNA (489bp) protein (163aa)
Transposase, TnpA family n=1 Tax=Rhodanobacter denitrificans RepID=M4NGM8_9GAMM
transposase, TnpA family
Transposase, TnpA family {ECO:0000313|EMBL:AGG88813.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter d
SCNpilot_cont_300_bf_scaffold_450_2

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1217..1441
DNA (225bp) protein (75aa)
Helix-turn-helix type 3 domain protein n=1 Tax=mine drainage metagenome RepID=T1BF48_9ZZZZ
Helix-turn-helix type 3 domain protein {ECO:0000313|EMBL:EQD67168.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA-binding protein
SCNpilot_cont_300_bf_scaffold_450_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1454..2197
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000361A610
SseB protein
SseB protein {ECO:0000313|EMBL:AGG88783.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
SCNpilot_cont_300_bf_scaffold_450_4
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2564..4837
DNA (2274bp) protein (758aa)
Type I secretion system ABC transporter, HlyB family n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C294_9XANT rbh
Type I secretion system ABC transporter, HlyB family {ECO:0000313|EMBL:EGD20359.1}; Flags: Precursor;; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
ABC transporter permease/ATP-binding protein
SCNpilot_cont_300_bf_scaffold_450_5
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4842..6263
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003499F1A rbh
Hemolysin secretion protein D {ECO:0000313|EMBL:KJV33806.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter
membrane-fusion protein
SCNpilot_cont_300_bf_scaffold_450_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6276..7088
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W2Q9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93750.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
SCNpilot_cont_300_bf_scaffold_450_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7147..15474
DNA (8328bp) protein (2776aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037AC6AF rbh
HlyJ hemolysin-like protein {ECO:0000313|EMBL:EIL87645.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
HlyJ hemolysin-like protein
SCNpilot_cont_300_bf_scaffold_450_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15638..17296
DNA (1659bp) protein (553aa)
Alpha-glucosidase {ECO:0000313|EMBL:ABF39392.1}; EC=3.2.1.20 {ECO:0000313|EMBL:ABF39392.1};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
Alpha-glucosidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUQ8_KORVE rbh
Alpha-glucosidase
SCNpilot_cont_300_bf_scaffold_450_9
unknown

Not on your lists

17733..17909
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_450_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18177..18686
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH23_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98764.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
SCNpilot_cont_300_bf_scaffold_450_11
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18803..22033)
DNA (3231bp) protein (1077aa)
Heavy metal efflux pump, CzcA family n=2 Tax=Ralstonia RepID=C6BQJ4_RALP1 rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ACS66352.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstoni
heavy metal efflux pump, CzcA family
SCNpilot_cont_300_bf_scaffold_450_12
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22030..23184)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Ralstonia solanacearum RepID=UPI0003088135 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPX94530.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-0
heavy metal resistance protein
SCNpilot_cont_300_bf_scaffold_450_13
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23186..24385)
DNA (1200bp) protein (400aa)
Outer membrane efflux protein n=3 Tax=Ralstonia RepID=C6BQL8_RALP1 rbh
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACS66376.1}; Flags: Precursor;; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" sour
SCNpilot_cont_300_bf_scaffold_450_14
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24468..25049)
DNA (582bp) protein (194aa)
RNA polymerase sigma factor n=1 Tax=Ralstonia syzygii R24 RepID=G3A191_9RALS
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzyg
RNA polymerase sigma factor
SCNpilot_cont_300_bf_scaffold_450_15
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25046..25489)
DNA (444bp) protein (148aa)
NAD+ synthetase n=1 Tax=Ralstonia solanacearum RepID=UPI0002FC073B
NAD+ synthetase
NAD+ synthetase {ECO:0000313|EMBL:AJW47593.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
SCNpilot_cont_300_bf_scaffold_450_16
unknown

Not on your lists

comp(25486..25779)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_450_17
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25922..26200
DNA (279bp) protein (93aa)
hypothetical protein id=12495453 bin=THIO_HI species=Ideonella sp. B508-1 genus=Ideonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:ENO82003.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_450_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26276..27613
DNA (1338bp) protein (446aa)
Arabinose efflux permease family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFP4_9GAMM
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AGG88877.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhoda
SCNpilot_cont_300_bf_scaffold_450_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27649..28680)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIF7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99248.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
SCNpilot_cont_300_bf_scaffold_450_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28818..30425)
DNA (1608bp) protein (536aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WR32_9GAMM
Glycosyl transferase family protein {ECO:0000313|EMBL:EIM01924.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
SCNpilot_cont_300_bf_scaffold_450_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30422..31447)
DNA (1026bp) protein (342aa)
ADP-heptose:LPS heptosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHN4_9GAMM rbh
ADP-heptose:LPS heptosyltransferase
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:AGG89168.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
SCNpilot_cont_300_bf_scaffold_450_22

Not on your lists

comp(31687..33594)
DNA (1908bp) protein (636aa)
asparagine synthetase (EC:6.3.5.4)
Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=mine drainage metagenome RepID=T1AEH0_9ZZZZ rbh
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EQD59021.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_cont_300_bf_scaffold_450_23

Not on your lists

comp(33617..35179)
DNA (1563bp) protein (521aa)
Glycosyl transferase family 39 {ECO:0000313|EMBL:EQD58187.1}; EC=2.-.-.- {ECO:0000313|EMBL:EQD58187.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mi
Glycosyl transferase family 39 n=1 Tax=mine drainage metagenome RepID=T1ALE6_9ZZZZ rbh
glycosyltransferase
SCNpilot_cont_300_bf_scaffold_450_24

Not on your lists

comp(35197..35478)
DNA (282bp) protein (94aa)
Putative conserved protein, lipid A biosynthesis n=1 Tax=mine drainage metagenome RepID=T1C168_9ZZZZ
Putative conserved protein, lipid A biosynthesis {ECO:0000313|EMBL:EQD59019.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
lipid A biosynthesis-like
SCNpilot_cont_300_bf_scaffold_450_25

Not on your lists

comp(35472..35786)
DNA (315bp) protein (105aa)
Lipid A biosynthesis domain-containing protein n=1 Tax=mine drainage metagenome RepID=T1AR34_9ZZZZ
Lipid A biosynthesis domain-containing protein {ECO:0000313|EMBL:EQD59018.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Lipid A biosynthesis, N-terminal
SCNpilot_cont_300_bf_scaffold_450_26
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35783..36586)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034745D8 rbh
short-chain dehydrogenase/reductase SDR Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_450_27
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36599..37258)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B5BBA
TPR repeats containing protein {ECO:0000313|EMBL:EKF73843.1}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivo
hypothetical protein
SCNpilot_cont_300_bf_scaffold_450_28
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37261..37947)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037D3D70 rbh
long-chain fatty acid--CoA ligase
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:AJC47237.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomon
SCNpilot_cont_300_bf_scaffold_450_29
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37916..39406)
DNA (1491bp) protein (497aa)
Long-chain-fatty-acid--CoA ligase FadD15 {ECO:0000313|EMBL:GAO33488.1}; EC=6.2.1.3 {ECO:0000313|EMBL:GAO33488.1};; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales;
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B4F36 rbh
AMP-dependent synthetase and ligase
SCNpilot_cont_300_bf_scaffold_450_30
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39408..40145)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036C5B0E
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
hypothetical protein
Displaying items 1-30 of 36 in total

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