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SCNpilot_cont_300_bf_scaffold_936

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_936_1
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..600)
DNA (600bp) protein (200aa)
YadA domain protein n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1K7T1_BURCC
Autotransporter adhesin {ECO:0000313|EMBL:EAY65782.1}; TaxID=350702 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
YadA domain-containing protein
SCNpilot_cont_300_bf_scaffold_936_2
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(621..1751)
DNA (1131bp) protein (377aa)
Hemagluttinin like protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13QC4_BURXL
coiled stalk of trimeric autotransporter adhesin family protein
Hemagluttinin like protein {ECO:0000313|EMBL:ABE33715.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xe
SCNpilot_cont_300_bf_scaffold_936_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2111..2797)
DNA (687bp) protein (229aa)
Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L629_9GAMM
Stenotrophomonas maltophilia strain ZBG7B contig_71, whole genome shotgun sequence {ECO:0000313|EMBL:KIP82313.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
luxR; two component LuxR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_936_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2928..3632
DNA (705bp) protein (235aa)
Response regulator uvrY n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D083_STEMA
Stenotrophomonas maltophilia strain ZBG7B contig_71, whole genome shotgun sequence {ECO:0000313|EMBL:KIP82312.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
two component LuxR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_936_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3704..7123)
DNA (3420bp) protein (1140aa)
Hpt sensor hybrid histidine kinase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K182_STEMA rbh
Stenotrophomonas maltophilia strain ZBG7B contig_71, whole genome shotgun sequence {ECO:0000313|EMBL:KIP82329.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
Hpt sensor hybrid histidine kinase
SCNpilot_cont_300_bf_scaffold_936_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7266..7595)
DNA (330bp) protein (110aa)
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AHK43106.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" s
SCNpilot_cont_300_bf_scaffold_936_7
unknown

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comp(7634..7831)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_936_8
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7876..13902)
DNA (6027bp) protein (2009aa)
Putative outer membrane autotransporter n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1IEN2_PSEE4
outer membrane autotransporter
Putative outer membrane autotransporter {ECO:0000313|EMBL:CAK13873.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
SCNpilot_cont_300_bf_scaffold_936_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14844..15104)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F66259
carbonic anhydrase
Carbonic anhydrase {ECO:0000313|EMBL:AHX13900.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_300_bf_scaffold_936_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16139..17476)
DNA (1338bp) protein (446aa)
hypothetical protein id=1328169 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_cont_300_bf_scaffold_936_11
unknown

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comp(18082..18180)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_936_12
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18204..19094)
DNA (891bp) protein (297aa)
DNA methyltransferase n=1 Tax=Pseudomonas aeruginosa DHS01 RepID=V4Z5E5_PSEAI
DNA methyltransferase {ECO:0000313|EMBL:KJV06910.1}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-
DNA methyltransferase
SCNpilot_cont_300_bf_scaffold_936_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19945..20316
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV10_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03302.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
SCNpilot_cont_300_bf_scaffold_936_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20414..20905)
DNA (492bp) protein (164aa)
RNA polymerase sigma factor RpoD n=1 Tax=Dyella ginsengisoli RepID=UPI00034D49BB
RNA polymerase, sigma 70 subunit, RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
Displaying 14 items

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