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SCNpilot_cont_300_bf_scaffold_564

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_564_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(275..1009)
DNA (735bp) protein (245aa)
ABC transporter n=1 Tax=Microbacterium paraoxydans RepID=UPI00037AB1DC rbh
ABC transporter related protein {ECO:0000313|EMBL:EIC08914.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniforman
hypothetical protein
SCNpilot_cont_300_bf_scaffold_564_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1006..1779)
DNA (774bp) protein (258aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E195_9MICO rbh
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EPD86818.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteri
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_564_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1875..2750)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXQ1_9MICO rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC58497.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium homi
amino acid ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_564_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2872..3420)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379374C
Uncharacterized protein {ECO:0000313|EMBL:CDJ99213.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_564_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3523..4170)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEW2_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD86816.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
NAD(P)H dehydrogenase (quinone)
SCNpilot_cont_300_bf_scaffold_564_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4167..4619)
DNA (453bp) protein (151aa)
Regulatory protein MarR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E198_9MICO
Regulatory protein MarR {ECO:0000313|EMBL:KIC58495.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator, MarR family
SCNpilot_cont_300_bf_scaffold_564_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4696..5499)
DNA (804bp) protein (268aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACG4_9MICO rbh
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:EPD86813.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacteri
SCNpilot_cont_300_bf_scaffold_564_8
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5484..6269)
DNA (786bp) protein (262aa)
2-oxo-hept-3-ene-1,7-dioate hydratase n=1 Tax=Serinicoccus marinus RepID=UPI0003B74394 rbh
2-oxo-hepta-3-ene-1,7-dioate hydratase {ECO:0000313|EMBL:KDA06459.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH
2-keto-4-pentenoate hydratase
SCNpilot_cont_300_bf_scaffold_564_9
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6417..7583)
DNA (1167bp) protein (389aa)
bphC; manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase BphC (EC:1.13.11.39) rbh
Putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WC41_9ACTO rbh
Putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase {ECO:0000313|EMBL:GAB91281.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizos
SCNpilot_cont_300_bf_scaffold_564_10
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7704..9236)
DNA (1533bp) protein (511aa)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:KHL00084.1}; EC=1.2.1.8 {ECO:0000313|EMBL:KHL00084.1};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteri
dhaS2; aldehyde dehydrogenase DhaS (EC:1.2.1.3)
Putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WGL2_9ACTO rbh
SCNpilot_cont_300_bf_scaffold_564_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9292..9999)
DNA (708bp) protein (236aa)
GntR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A7C50
Uncharacterized protein {ECO:0000313|EMBL:EPD86809.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_564_12
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9996..11531)
DNA (1536bp) protein (512aa)
hpaG; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase (EC:5.3.3.10 4.1.1.68)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00037950EB rbh
4-hydroxyphenylacetate degradation bifunctionalisomerase/decarboxylase {ECO:0000313|EMBL:EZP26151.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;
SCNpilot_cont_300_bf_scaffold_564_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11653..13035
DNA (1383bp) protein (461aa)
Major facilitator superfamily MFS_1 n=2 Tax=Microbacterium RepID=H8E1A6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD86807.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
MFS transporter
SCNpilot_cont_300_bf_scaffold_564_14
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13066..14967
DNA (1902bp) protein (634aa)
Phenol 2-monooxygenase {ECO:0000313|EMBL:KIC58487.1}; EC=1.14.13.7 {ECO:0000313|EMBL:KIC58487.1};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" s
phenol 2-monooxygenase (EC:1.14.13.7)
Phenol 2-monooxygenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEV2_9MICO rbh
SCNpilot_cont_300_bf_scaffold_564_15
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14978..16747)
DNA (1770bp) protein (590aa)
Na+/H+ antiporter n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1A8_9MICO rbh
Sodium:proton antiporter {ECO:0000313|EMBL:EXJ51114.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
NhaP-type Na+/H+ and K+/H+ antiporters
SCNpilot_cont_300_bf_scaffold_564_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16907..18574)
DNA (1668bp) protein (556aa)
acetolactate synthase (EC:2.2.1.6)
Thiamine pyrophosphate central domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1A9_9MICO rbh
Thiamine pyrophosphate central domain-containing protein {ECO:0000313|EMBL:EIC08929.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Mic
SCNpilot_cont_300_bf_scaffold_564_17
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18700..19836
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000370D40A rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC58484.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_564_18
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19910..21238)
DNA (1329bp) protein (443aa)
Tat-translocated protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1B0_9MICO rbh
Tat-translocated protein {ECO:0000313|EMBL:EIC08930.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221
iron-dependent peroxidase
SCNpilot_cont_300_bf_scaffold_564_19
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21238..22464)
DNA (1227bp) protein (409aa)
Peptidase M75, Imelysin n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1B1_9MICO rbh
Predicted periplasmic lipoprotein {ECO:0000313|EMBL:CDJ99132.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
periplasmic lipoprotein
SCNpilot_cont_300_bf_scaffold_564_20
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22461..23471)
DNA (1011bp) protein (337aa)
Iron permease FTR1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1B2_9MICO rbh
High-affinity Fe2+/Pb2+ permease {ECO:0000313|EMBL:KIC58481.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
high-affinity Fe2+/Pb2+ permease
SCNpilot_cont_300_bf_scaffold_564_21
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23639..25081)
DNA (1443bp) protein (481aa)
Helix-turn-helix domain protein n=2 Tax=Microbacterium RepID=H8E1B4_9MICO rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:EIC08934.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniforman
hipB; transcriptional regulator
SCNpilot_cont_300_bf_scaffold_564_22
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25188..27077
DNA (1890bp) protein (630aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACF2_9MICO rbh
pckG; phosphoenolpyruvate carboxykinase (GTP)
SCNpilot_cont_300_bf_scaffold_564_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27207..29099)
DNA (1893bp) protein (631aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1B6_9MICO rbh
ABC transporter related protein {ECO:0000313|EMBL:EIC08936.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniforman
multidrug ABC transporter ATPase/permease
SCNpilot_cont_300_bf_scaffold_564_24
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29184..30125
DNA (942bp) protein (314aa)
Multidrug ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YZ05_9MICO rbh
Nodulation ABC transporter NodI {ECO:0000313|EMBL:EZP26115.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
putative multidrug export ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_564_25
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30122..30994
DNA (873bp) protein (291aa)
ABC-2 type transporter n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1B8_9MICO rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans O
ABC-2 type transporter
SCNpilot_cont_300_bf_scaffold_564_26
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30991..31827
DNA (837bp) protein (279aa)
Lipooligosaccharide transport system permease n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BDU3_9MICO rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 1
putative multidrug export ABC transporterpermease
SCNpilot_cont_300_bf_scaffold_564_27
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31903..33348)
DNA (1446bp) protein (482aa)
MFS transporter, metabolite:H+ symporter (MHS) family protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACE7_9MICO rbh
MFS transporter, metabolite:H+ symporter (MHS) family protein {ECO:0000313|EMBL:EPD86793.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source
permease of the major facilitator superfamily
SCNpilot_cont_300_bf_scaffold_564_28
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33570..33920)
DNA (351bp) protein (117aa)
Fe-S protein n=2 Tax=Microbacterium RepID=H8E1C1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86792.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
Fe-S protein
SCNpilot_cont_300_bf_scaffold_564_29
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34011..34484)
DNA (474bp) protein (158aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1C3_9MICO
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
ribH; riboflavin synthase beta-chain
SCNpilot_cont_300_bf_scaffold_564_30
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34672..35415)
DNA (744bp) protein (248aa)
riboflavin biosynthesis protein RibA n=1 Tax=Microbacterium RepID=UPI00036EB859
Riboflavin biosynthesis protein RibBA {ECO:0000256|SAAS:SAAS00280052}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. M
ribA; 3,4-dihydroxy-2-butanone 4-phosphate synthase
Displaying 30 items

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