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SCNpilot_cont_300_bf_scaffold_787

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_787_1
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..98
DNA (96bp) protein (32aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003741CB7
integrase
Integrase {ECO:0000313|EMBL:AJC46516.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_cont_300_bf_scaffold_787_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1138..1476
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9T4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96225.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
putative uncharacterized protein
SCNpilot_cont_300_bf_scaffold_787_3
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1539..2684)
DNA (1146bp) protein (382aa)
integrase, partial n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B39A65 rbh
Uncharacterized protein {ECO:0000313|EMBL:EWC53081.1}; TaxID=1401257 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axono
integrase family protein
SCNpilot_cont_300_bf_scaffold_787_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3596..4864
DNA (1269bp) protein (423aa)
Integrase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KMN8_STEMA
integrase
Integrase {ECO:0000313|EMBL:CCH12327.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;
SCNpilot_cont_300_bf_scaffold_787_5
unknown

Not on your lists

5538..5978
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_787_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6080..6295
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:EKE73775.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
SCNpilot_cont_300_bf_scaffold_787_7
unknown

Not on your lists

6292..6612
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_787_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6650..7051
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL6 RepID=UPI00035CF476
Uncharacterized protein {ECO:0000313|EMBL:KDE90585.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
hypothetical protein
SCNpilot_cont_300_bf_scaffold_787_9
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7304..8140)
DNA (837bp) protein (279aa)
Uncharacterized protein {ECO:0000313|EMBL:AJY48463.1}; TaxID=470 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baum
SCNpilot_cont_300_bf_scaffold_787_10
unknown

Not on your lists

8745..8933
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_787_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9635..10501
DNA (867bp) protein (289aa)
CitryL-CoA lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV37_9GAMM rbh
CitryL-CoA lyase {ECO:0000313|EMBL:EIM03329.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxyd
aldolase/citrate lyase family protein
SCNpilot_cont_300_bf_scaffold_787_12
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10528..12954
DNA (2427bp) protein (809aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364E3A2 rbh
putative sodium/solute symporter Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
sodium:solute symporter
SCNpilot_cont_300_bf_scaffold_787_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13040..13921
DNA (882bp) protein (294aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV39_9GAMM rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIM03331.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_787_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14192..16384
DNA (2193bp) protein (731aa)
Putative TonB-dependent receptor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV40_9GAMM rbh
TonB-dependent receptor
Putative TonB-dependent receptor {ECO:0000313|EMBL:EIM03332.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
SCNpilot_cont_300_bf_scaffold_787_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16687..17892
DNA (1206bp) protein (402aa)
Beta-lactamase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV41_9GAMM rbh
Beta-lactamase {ECO:0000313|EMBL:EIM03333.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydan
beta-lactamase
SCNpilot_cont_300_bf_scaffold_787_16
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17889..18830
DNA (942bp) protein (314aa)
ribokinase; K00852 ribokinase [EC:2.7.1.15] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBA2_9BURK rbh
ribokinase
SCNpilot_cont_300_bf_scaffold_787_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18860..21049
DNA (2190bp) protein (730aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV42_9GAMM rbh
Sulfatase-modifying factor protein {ECO:0000313|EMBL:AHX15784.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jian
sulfatase-modifying factor protein
SCNpilot_cont_300_bf_scaffold_787_18
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21046..22905
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037CC429 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX15783.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
SCNpilot_cont_300_bf_scaffold_787_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23019..24212
DNA (1194bp) protein (398aa)
formyl-CoA transferase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003662A92 rbh
putative acyl-CoA transferase
Putative acyl-CoA transferase {ECO:0000313|EMBL:AGU51094.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax para
SCNpilot_cont_300_bf_scaffold_787_20
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24226..24354
DNA (129bp) protein (43aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanth
Transaldolase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z8D3_XANCT
tal; transaldolase B
Displaying 20 items

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