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SCNpilot_cont_300_bf_scaffold_2354

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2354_1
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..99
DNA (99bp) protein (33aa)
tufA; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu 1 n=6 Tax=Xanthomonas RepID=EFTU1_XANC8
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria;
SCNpilot_cont_300_bf_scaffold_2354_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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330..737
DNA (408bp) protein (136aa)
Protein translocase subunit SecE n=3 Tax=Stenotrophomonas maltophilia RepID=B4SKV0_STRM5
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotropho
secE; preprotein translocase subunit SecE
SCNpilot_cont_300_bf_scaffold_2354_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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748..1308
DNA (561bp) protein (187aa)
Transcription termination/antitermination protein NusG n=9 Tax=Stenotrophomonas RepID=B2FQ33_STRMK rbh
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomon
SCNpilot_cont_300_bf_scaffold_2354_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1511..1939
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=11 Tax=Stenotrophomonas RepID=RL11_STRM5
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Ste
SCNpilot_cont_300_bf_scaffold_2354_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1944..2642
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=2 Tax=Stenotrophomonas maltophilia RepID=I0KJW6_STEMA rbh
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas
SCNpilot_cont_300_bf_scaffold_2354_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3026..3559
DNA (534bp) protein (178aa)
50S ribosomal protein L10 n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3F1Y3_STEMA rbh
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenot
rplJ; 50S ribosomal protein L10
SCNpilot_cont_300_bf_scaffold_2354_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3623..3991
DNA (369bp) protein (123aa)
50S ribosomal protein L7 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030CA5A2
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomona
SCNpilot_cont_300_bf_scaffold_2354_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4301..8440
DNA (4140bp) protein (1380aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CC
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000312F12B rbh
SCNpilot_cont_300_bf_scaffold_2354_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8531..12754
DNA (4224bp) protein (1408aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
DNA-directed RNA polymerase subunit beta' n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJX0_STEMA rbh
DNA-directed RNA polymerase subunit beta'
SCNpilot_cont_300_bf_scaffold_2354_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13005..13379
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=11 Tax=Stenotrophomonas RepID=RS12_STRM5
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Ste
SCNpilot_cont_300_bf_scaffold_2354_11
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13392..13859
DNA (468bp) protein (156aa)
30S ribosomal protein S7 n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UBV3_XANAP
rpsG; 30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas a
SCNpilot_cont_300_bf_scaffold_2354_12
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13999..16128
DNA (2130bp) protein (710aa)
Elongation factor G n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVH3_PSEUU rbh
translation elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonada
SCNpilot_cont_300_bf_scaffold_2354_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16183..16281
DNA (99bp) protein (33aa)
translation elongation factor Tu n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624D46
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacter
Displaying 13 items

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