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SCNpilot_cont_300_bf_scaffold_1282

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1282_1
unknown

Not on your lists

3..86
DNA (84bp) protein (28aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1282_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83..1300
DNA (1218bp) protein (406aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bra
Tryptophan synthase beta chain n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZK0_STAND rbh
tryptophan synthase subunit beta
SCNpilot_cont_300_bf_scaffold_1282_3
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1377..3305
DNA (1929bp) protein (643aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D2C21E rbh
Uncharacterized protein {ECO:0000313|EMBL:KFG67058.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.
cell wall biosynthesis glycosyltransferase rbh
SCNpilot_cont_300_bf_scaffold_1282_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3250..3846)
DNA (597bp) protein (199aa)
Electron transport protein SCO1/SenC n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A479_STAND
SCO1/SenC/PrrC protein {ECO:0000313|EMBL:KFC70779.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
electron transporter SCO1/SenC
SCNpilot_cont_300_bf_scaffold_1282_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3878..4054)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC70780.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_300_bf_scaffold_1282_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4257..5270)
DNA (1014bp) protein (338aa)
Transcriptional regulator, LysR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IC37_XANP2 rbh
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KFC75528.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea s
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1282_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5379..6215
DNA (837bp) protein (279aa)
Alpha/beta hydrolase fold-3 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q127F3_POLSJ
Esterase/lipase/thioesterase {ECO:0000313|EMBL:KFC75527.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_300_bf_scaffold_1282_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6268..7467
DNA (1200bp) protein (400aa)
RND family efflux transporter MFP subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZP3_9BURK
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KFC75526.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea
RND family efflux transporter MFP subunit
SCNpilot_cont_300_bf_scaffold_1282_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7543..10722
DNA (3180bp) protein (1060aa)
transporter n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003497EEB rbh
Hydrophobe/amphiphile efflux-1 HAE1 {ECO:0000313|EMBL:KFC75525.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85
hydrophobe/amphiphile efflux-1 (HAE1) family protein
SCNpilot_cont_300_bf_scaffold_1282_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10860..11270)
DNA (411bp) protein (137aa)
Transcriptional regulator, HxlR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IET4_XANP2
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ABS66527.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xantho
SCNpilot_cont_300_bf_scaffold_1282_11
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11618..12241
DNA (624bp) protein (208aa)
Alpha/beta hydrolase fold protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YF27_9BURK
chloride peroxidase
Chloride peroxidase {ECO:0000313|EMBL:AFT84885.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenolir
SCNpilot_cont_300_bf_scaffold_1282_12
unknown

Not on your lists

12282..12443
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1282_13
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12440..12718
DNA (279bp) protein (93aa)
membrane protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036EE448
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD44097.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_1282_14
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12718..14694
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IBM0_AZOC5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF89089.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulino
SCNpilot_cont_300_bf_scaffold_1282_15
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14696..15115
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IBM3_AZOC5
DoxX family protein {ECO:0000313|EMBL:KDP75846.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensif
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1282_16
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15178..16758
DNA (1581bp) protein (527aa)
MFS permease n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QEU1_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM61962.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1282_17
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16755..18107
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAI3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EWY40747.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1282_18
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18125..18802
DNA (678bp) protein (226aa)
Hydrolase n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UFK8_ALCXX
chloroperoxidase
Isochorismatase family protein {ECO:0000313|EMBL:AHC44475.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
SCNpilot_cont_300_bf_scaffold_1282_19
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19088..20266)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TV84_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE10372.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1282_20
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20316..21758)
DNA (1443bp) protein (481aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TV83_9BRAD rbh
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:CCE10371.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source
peptidase C14 caspase catalytic subunit p20
SCNpilot_cont_300_bf_scaffold_1282_21
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21926..23188
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHD2_METS4 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL60179.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" sou
SCNpilot_cont_300_bf_scaffold_1282_22
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23185..23631
DNA (447bp) protein (149aa)
Methylmalonyl-CoA mutase (Fragment) n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IPP0_9BRAD
ATPase {ECO:0000313|EMBL:KHD18193.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1282_23
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23653..25350
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TV82_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE10370.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1282_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25490..25900)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035D591A
Amine oxidase {ECO:0000313|EMBL:KFC76009.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amine oxidase
SCNpilot_cont_300_bf_scaffold_1282_25
unknown

Not on your lists

26197..26802
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1282_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26646..28190)
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00036F1598 rbh
Na+/H+ antiporter {ECO:0000313|EMBL:EKS36990.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sodium/hydrogen exchanger
SCNpilot_cont_300_bf_scaffold_1282_27
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28404..29504)
DNA (1101bp) protein (367aa)
MdlB n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5A8L6_BURGB rbh
Mandelate dehydrogenase {ECO:0000313|EMBL:KGE02014.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
MdlB
SCNpilot_cont_300_bf_scaffold_1282_28
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29504..31219)
DNA (1716bp) protein (572aa)
acetolactate synthase catalytic subunit (EC:2.2.1.6)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D7AE9B rbh
Acetolactate synthase {ECO:0000313|EMBL:KGE02013.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source
SCNpilot_cont_300_bf_scaffold_1282_29
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31240..32538)
DNA (1299bp) protein (433aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E56FDC
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KGE02012.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
TRAP C4-dicarboxylate transport system permease DctM
SCNpilot_cont_300_bf_scaffold_1282_30
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32543..33097)
DNA (555bp) protein (185aa)
Putative TrapT family, dctQ subunit, C4-dicarboxylate transport n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ES36_BRASB
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KGE02011.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
TRAP C4-dicarboxylate transport system subunit DctQ
Displaying items 1-30 of 47 in total

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