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SCNpilot_cont_300_bf_scaffold_586

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Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_586_1
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..919
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U1H3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ02156.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensi
hypothetical protein
SCNpilot_cont_300_bf_scaffold_586_2
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

984..2021
DNA (1038bp) protein (346aa)
ABC transporter substrate-binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NXU9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY77702.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
SCNpilot_cont_300_bf_scaffold_586_3
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2018..2878
DNA (861bp) protein (287aa)
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:CQR52866.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
Binding-protein-dependent transport systems inner membrane component id=4897963 bin=GWC2_Methylomirabilis_70_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
SCNpilot_cont_300_bf_scaffold_586_4
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2875..3675
DNA (801bp) protein (267aa)
ABC transporter permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J401_POLGS
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KGJ02621.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus
SCNpilot_cont_300_bf_scaffold_586_5
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3678..4754
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000361082A
spermidine/putrescine ABC transporter ATPase
Spermidine/putrescine ABC transporter ATPase {ECO:0000313|EMBL:AJC19766.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="P
SCNpilot_cont_300_bf_scaffold_586_6
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4933..5550)
DNA (618bp) protein (206aa)
Short chain dehydrogenase n=1 Tax=Burkholderia cepacia GG4 RepID=J7J363_BURCE
Short-chain dehydrogenase {ECO:0000313|EMBL:KIC58942.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas
short chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_586_7
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5716..6621)
DNA (906bp) protein (302aa)
peptide ABC transporter permease n=1 Tax=Roseomonas sp. B5 RepID=UPI00030C76D8 rbh
Oligopeptide ABC superfamily transporter membrane protein
Oligopeptide ABC superfamily transporter membrane protein {ECO:0000313|EMBL:AHF75788.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; So
SCNpilot_cont_300_bf_scaffold_586_8
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6621..7586)
DNA (966bp) protein (322aa)
Putative oligopeptide ABC transporter, permease protein AppB n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3N5_9PROT rbh
Putative transmembrane ABC transporter
Putative transmembrane ABC transporter {ECO:0000313|EMBL:AHF75787.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="So
SCNpilot_cont_300_bf_scaffold_586_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7686..9233)
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000379F964 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD23327.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
long-chain-fatty-acid--CoA ligase rbh
SCNpilot_cont_300_bf_scaffold_586_10
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9365..11653
DNA (2289bp) protein (763aa)
AMP-binding enzyme n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7W8_9PROT rbh
AMP-binding enzyme {ECO:0000313|EMBL:EHL96211.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Ace
fatty acid CoA ligase
SCNpilot_cont_300_bf_scaffold_586_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11710..12549
DNA (840bp) protein (280aa)
Transcriptional regulator, IclR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XK40_VARPD
transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AGU53237.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
SCNpilot_cont_300_bf_scaffold_586_12
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12709..14298
DNA (1590bp) protein (530aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7X0_9PROT rbh
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EHL96213.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassifi
ABC transporter substrate binding protein (oligopeptide)
SCNpilot_cont_300_bf_scaffold_586_13
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14469..15065
DNA (597bp) protein (199aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
PREDICTED: histidine biosynthesis trifunctional protein-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1605F
histidinol dehydrogenase
SCNpilot_cont_300_bf_scaffold_586_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15299..15643)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000307F1B0
Peptidase, family M23/M37 {ECO:0000313|EMBL:KFC69227.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_586_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15640..16260)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EF462E
Peptidase, family M23/M37 {ECO:0000313|EMBL:KFC69227.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_586_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16244..17380)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030C32DD
Uncharacterized protein {ECO:0000313|EMBL:KFC71644.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_586_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17417..18817)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E44858 rbh
Efflux transporter {ECO:0000313|EMBL:KFC71645.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
efflux transporter
SCNpilot_cont_300_bf_scaffold_586_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18817..20532)
DNA (1716bp) protein (572aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F936DA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC71646.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
protease secretion ATP-binding protein
SCNpilot_cont_300_bf_scaffold_586_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21307..22716
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000362499C
calcium-binding protein
Ca2+-binding protein, RTX toxin {ECO:0000313|EMBL:AGA31515.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisph
SCNpilot_cont_300_bf_scaffold_586_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22862..24391)
DNA (1530bp) protein (510aa)
Asparagine synthetase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HR83_9RHIZ rbh
Asparagine synthetase B {ECO:0000313|EMBL:EHK56766.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alh
SCNpilot_cont_300_bf_scaffold_586_21
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24671..25324
DNA (654bp) protein (218aa)
choline ABC transporter permease n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B322A2 rbh
Choline ABC transporter permease {ECO:0000313|EMBL:KGJ12127.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus
binding-protein-dependent transport systems inner membrane component
SCNpilot_cont_300_bf_scaffold_586_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25321..26433
DNA (1113bp) protein (371aa)
ABC transporter ATP-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B3B8F2 rbh
ABC transporter related protein {ECO:0000313|EMBL:KFC74815.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glycine betaine/L-proline ABC transporter, ATPase subunit rbh
SCNpilot_cont_300_bf_scaffold_586_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26426..27166
DNA (741bp) protein (247aa)
L-proline glycine betaine ABC transport system permease protein ProW n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H2Q3_9PROT
Osmoprotectant transport system substrate-binding protein {ECO:0000313|EMBL:KFC74816.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;"
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_586_24
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27205..28092
DNA (888bp) protein (296aa)
glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4FDF3 rbh
Substrate-binding region of ABC-type glycine betaine transporter {ECO:0000313|EMBL:EKV31868.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
glycine betaine ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_586_25
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28361..29596)
DNA (1236bp) protein (412aa)
Citrate transporter n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QR78_METTR rbh
Na+/H+ antiporter NhaD-like permease {ECO:0000313|EMBL:EIM28393.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvi
citrate transporter
SCNpilot_cont_300_bf_scaffold_586_26
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29602..30915)
DNA (1314bp) protein (438aa)
MFS transporter n=1 Tax=Methylobacterium sp. 77 RepID=UPI000380EA8B rbh
major facilitator transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACB25402.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Me
SCNpilot_cont_300_bf_scaffold_586_27
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31697..32536)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036A9EA2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHQ95784.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_586_28
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32544..32822)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRL8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:GAN80588.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminol
hypothetical protein
SCNpilot_cont_300_bf_scaffold_586_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33014..36388
DNA (3375bp) protein (1125aa)
Putative serine protease/outer membrane autotransporter n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RYZ5_9BRAD
Putative serine protease/outer membrane autotransporter {ECO:0000313|EMBL:KFC64869.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" so
outer membrane autotransporter barrel domain-containing protein
SCNpilot_cont_300_bf_scaffold_586_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36620..37000)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G5K6_9BRAD
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:KFC63947.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
Displaying items 1-30 of 59 in total

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