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SCNpilot_cont_300_bf_scaffold_786

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_786_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..429)
DNA (429bp) protein (143aa)
IclR helix-turn-helix protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZXK0_9PROT
Transcriptional regulator {ECO:0000313|EMBL:KFC70532.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_786_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(887..1495)
DNA (609bp) protein (203aa)
Transcriptional regulator, luxR family n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHU4_RHIRD
Transcriptional regulator, luxR family {ECO:0000313|EMBL:EGP54163.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Ag
two component LuxR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_786_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1681..2463)
DNA (783bp) protein (261aa)
Transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P286_AZOS1 rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAI74906.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum
SCNpilot_cont_300_bf_scaffold_786_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2514..3482
DNA (969bp) protein (323aa)
Ribokinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P287_AZOS1
ribokinase
Ribokinase {ECO:0000313|EMBL:BAI74907.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B51
SCNpilot_cont_300_bf_scaffold_786_5
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3581..4471
DNA (891bp) protein (297aa)
Transcriptional regulator, LuxR family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EQ47_BRASB
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABQ38291.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
SCNpilot_cont_300_bf_scaffold_786_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4782..5903)
DNA (1122bp) protein (374aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM26_9RHIZ rbh
anmK; anhydro-N-acetylmuramic acid kinase
SCNpilot_cont_300_bf_scaffold_786_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5927..6235)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TIS1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC75546.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_786_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6239..6526)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BI46_9RHIZ
Type IV secretion system protein VirB3 {ECO:0000313|EMBL:KFC75547.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. L
hypothetical protein
SCNpilot_cont_300_bf_scaffold_786_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6565..7272)
DNA (708bp) protein (236aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=PYRF_RHOP5
SCNpilot_cont_300_bf_scaffold_786_10
unknown

Not on your lists

7305..8042
DNA (738bp) protein (246aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_786_11
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8076..8840
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL67_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFG68262.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.
putative integral membrane protein
SCNpilot_cont_300_bf_scaffold_786_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8855..9517)
DNA (663bp) protein (221aa)
DSBA oxidoreductase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPS4_METNO
DSBA oxidoreductase {ECO:0000313|EMBL:KFC75551.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DSBA oxidoreductase
SCNpilot_cont_300_bf_scaffold_786_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9589..10656)
DNA (1068bp) protein (356aa)
L-lysine 2,3-aminomutase (KAM) (LAM) {ECO:0000313|EMBL:KFC75552.1}; EC=5.4.3.2 {ECO:0000313|EMBL:KFC75552.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyr
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E7778A
lysine 2,3-aminomutase YodO family protein
SCNpilot_cont_300_bf_scaffold_786_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10653..11717)
DNA (1065bp) protein (355aa)
Putative lysyl-tRNA synthetase (Lysine--tRNA ligase) {ECO:0000313|EMBL:KFC75553.1}; EC=6.1.1.6 {ECO:0000313|EMBL:KFC75553.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
Lysine--tRNA ligase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UJ98_METS4
lysine--tRNA ligase
SCNpilot_cont_300_bf_scaffold_786_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11897..12466
DNA (570bp) protein (190aa)
elongation factor P n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000310860C
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
translation elongation factor P
SCNpilot_cont_300_bf_scaffold_786_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12557..13075
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPA8_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KFC75555.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_786_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13092..13571
DNA (480bp) protein (160aa)
GCN5-related N-acetyltransferase n=2 Tax=Streptomyces RepID=E8WEA3_STRFA
Putative GCN5-related N-acetyltransferase (GNAT) {ECO:0000313|EMBL:KFC75556.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="B
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_786_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13867..14520)
DNA (654bp) protein (218aa)
Putative enzyme with metallo-hydrolase/oxidoreductase domain (YcbL-like) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J0I9_POLGS
Putative enzyme with metallo-hydrolase/oxidoreductase domain (YcbL-like) {ECO:0000313|EMBL:KFC75558.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobia
hypothetical protein
SCNpilot_cont_300_bf_scaffold_786_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14559..14885)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CCV6_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFC75559.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_300_bf_scaffold_786_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14882..16498)
DNA (1617bp) protein (539aa)
fumarate hydratase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031B301F rbh
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type {ECO:0000313|EMBL:KFC75560.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyr
fumarate hydratase
SCNpilot_cont_300_bf_scaffold_786_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16675..17148)
DNA (474bp) protein (158aa)
Nitrogen regulatory protein PtsN {ECO:0000313|EMBL:KFC75561.1}; EC=2.7.1.- {ECO:0000313|EMBL:KFC75561.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizo
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FDDD11
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
SCNpilot_cont_300_bf_scaffold_786_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17222..17848)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D93963
SSU ribosomal protein S30P / sigma 54 modulation protein {ECO:0000313|EMBL:KFC75562.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" s
ribosomal subunit interface protein
SCNpilot_cont_300_bf_scaffold_786_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17985..19514)
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FEA7C5 rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
RNA polymerase sigma 54 subunit RpoN rbh
SCNpilot_cont_300_bf_scaffold_786_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19678..20532)
DNA (855bp) protein (285aa)
Putative ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:KFC75564.1}; EC=3.6.3.- {ECO:0000313|EMBL:KFC75564.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
ABC transporter ATP-binding protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00035E9AFE rbh
ABC transporter-like protein
SCNpilot_cont_300_bf_scaffold_786_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20585..21298)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ91_9RHIZ
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:KFC75565.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" sour
OstA family protein
SCNpilot_cont_300_bf_scaffold_786_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21300..22082)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ90_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC75566.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_786_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22228..22842)
DNA (615bp) protein (205aa)
3'-5' exonuclease (EC:3.1.13.-)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIA2_AFIFE
3'-5' exonuclease {ECO:0000313|EMBL:KFC75567.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_300_bf_scaffold_786_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23071..23508
DNA (438bp) protein (146aa)
Putative membrane protein {ECO:0000313|EMBL:KFC75568.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_300_bf_scaffold_786_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23505..24716
DNA (1212bp) protein (404aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FD8BBB rbh
succinyl-diaminopimelate desuccinylase
SCNpilot_cont_300_bf_scaffold_786_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24781..25359
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DE4F4B
Uncharacterized protein {ECO:0000313|EMBL:KFC75570.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
Displaying items 1-30 of 52 in total

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