ggKbase home page

SCNpilot_cont_300_bf_scaffold_951

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_951_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..157)
DNA (156bp) protein (52aa)
Precorrin-8X methylmutase {ECO:0000313|EMBL:KFC62149.1}; EC=5.4.99.61 {ECO:0000313|EMBL:KFC62149.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
precorrin-8X methylmutase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E94D26
precorrin-8X methylmutase
SCNpilot_cont_300_bf_scaffold_951_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154..1434)
DNA (1281bp) protein (427aa)
Precorrin-3B synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWT9_9RHIZ rbh
Putative precorrin-3B synthase CobG {ECO:0000313|EMBL:KFC62148.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85
precorrin-3B synthase
SCNpilot_cont_300_bf_scaffold_951_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1431..4736)
DNA (3306bp) protein (1102aa)
Cobaltochelatase, CobN subunit n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UH24_METS4 rbh
Putative cobaltochelatase CobN {ECO:0000313|EMBL:KFC62147.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cobN; cobaltochelatase subunit CobN rbh
SCNpilot_cont_300_bf_scaffold_951_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4746..5801)
DNA (1056bp) protein (352aa)
CobW n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036F23E7 rbh
Putative cobalamin synthesis protein cobW {ECO:0000313|EMBL:KFC62146.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp
cobW; cobalamin biosynthesis protein CobW
SCNpilot_cont_300_bf_scaffold_951_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5806..6195)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031BE1F7
Uncharacterized protein {ECO:0000313|EMBL:KFC62145.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_951_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6234..6974)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036CEFFE
Cobalt transporter subunit CbtA (Proposed) {ECO:0000313|EMBL:KFC62144.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea s
Cobalt transporter, subunit CbtA
SCNpilot_cont_300_bf_scaffold_951_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6987..7163)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000378BC9D
Cobalt transporter subunit CbtB (Proposed) {ECO:0000313|EMBL:KFC62143.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea s
cbtB; cobalt transporter, subunit CbtB
SCNpilot_cont_300_bf_scaffold_951_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7441..7980
DNA (540bp) protein (180aa)
Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase {ECO:0000313|EMBL:KFC62142.1}; EC=2.7.1.156 {ECO:0000313|EMBL:KFC62142.1};; TaxID=1502851 species="Bacteria; Proteobacteria;
cobalbumin biosynthesis protein (EC:2.7.1.156)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00037C55C2
SCNpilot_cont_300_bf_scaffold_951_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7980..8588
DNA (609bp) protein (203aa)
Cob(I)alamin adenosyltransferase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UH16_METS4 rbh
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:KFC62141.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="
cob(I)alamin adenosyltransferase
SCNpilot_cont_300_bf_scaffold_951_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8601..9497)
DNA (897bp) protein (299aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
2-dehydropantoate 2-reductase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2D7_9BRAD
apbA; ketopantoate reductase ApbA
SCNpilot_cont_300_bf_scaffold_951_11
bacterium YEK0313, Bacteria

Not on your lists

9780..10400
DNA (621bp) protein (207aa)
TetR family transcriptional regulator n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0BAB6_ALCFA
HTH-type transcriptional repressor KstR {ECO:0000313|EMBL:CEJ10067.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator, TetR family
SCNpilot_cont_300_bf_scaffold_951_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10397..11995
DNA (1599bp) protein (533aa)
aidB; acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J5F7_ACIMA
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:KFC73790.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC
SCNpilot_cont_300_bf_scaffold_951_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12003..12950)
DNA (948bp) protein (316aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWU7_9RHIZ rbh
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp.
cobalamin biosynthesis protein CobD
SCNpilot_cont_300_bf_scaffold_951_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12979..14007
DNA (1029bp) protein (343aa)
L-threonine-O-3-phosphate decarboxylase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IS31_METNO rbh
Putative threonine-phosphate decarboxylase {ECO:0000313|EMBL:KFC62139.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea s
L-threonine-O-3-phosphate decarboxylase
SCNpilot_cont_300_bf_scaffold_951_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14092..15063
DNA (972bp) protein (324aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U9J3_METS4 rbh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:KFC62138.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
SCNpilot_cont_300_bf_scaffold_951_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15180..16397
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036EE6CB
Tryptophan-rich sensory protein {ECO:0000313|EMBL:KFC75726.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MFS transporter
SCNpilot_cont_300_bf_scaffold_951_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16407..16934)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q632_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC75725.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
conserved membrane protein of unknown function
SCNpilot_cont_300_bf_scaffold_951_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17008..18726)
DNA (1719bp) protein (573aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQM3_METS4 rbh
Cyclase {ECO:0000313|EMBL:KFC75119.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glucose-methanol-choline oxidoreductase
SCNpilot_cont_300_bf_scaffold_951_19
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18898..20937
DNA (2040bp) protein (680aa)
NAD+ synthetase n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036995EC rbh
NAD+ synthetase
NAD+ synthetase {ECO:0000313|EMBL:CCJ05912.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC
SCNpilot_cont_300_bf_scaffold_951_20
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20964..21371)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035ECCD0
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EET87753.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivor
Carboxymuconolactone decarboxylase
SCNpilot_cont_300_bf_scaffold_951_21
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21580..22554)
DNA (975bp) protein (325aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TF11_9BRAD rbh
N-acetyl-gamma-glutamyl-phosphate reductase
SCNpilot_cont_300_bf_scaffold_951_22
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23092..23781
DNA (690bp) protein (230aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LJM0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG68088.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_cont_300_bf_scaffold_951_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23889..25739)
DNA (1851bp) protein (617aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q989T5_RHILO rbh
Putative peptide transporter {ECO:0000313|EMBL:KFC66806.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter ATP-binding protein rbh
SCNpilot_cont_300_bf_scaffold_951_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25861..26802)
DNA (942bp) protein (314aa)
Putative oligopeptide transport system permease protein oppC (ABC superfamily, membrane) {ECO:0000313|EMBL:KFC66807.1}; EC=3.6.3.24 {ECO:0000313|EMBL:KFC66807.1};; TaxID=1502851 species="Bacteria; Pro
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UB59_METS4 rbh
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_300_bf_scaffold_951_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26768..27727)
DNA (960bp) protein (320aa)
Oligopeptide transport system permease protein (ABC superfamily, OppBC subfamily) {ECO:0000313|EMBL:KFC66808.1}; EC=3.6.3.24 {ECO:0000313|EMBL:KFC66808.1};; TaxID=1502851 species="Bacteria; Proteobact
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IM10_METNO rbh
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_300_bf_scaffold_951_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27875..29464)
DNA (1590bp) protein (530aa)
Substrate-binding protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G1E7_9BRAD rbh
Substrate-binding protein {ECO:0000313|EMBL:KFC75990.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
substrate-binding protein
SCNpilot_cont_300_bf_scaffold_951_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29825..30688)
DNA (864bp) protein (288aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1502851 species="B
purU; formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y934_9BRAD rbh
SCNpilot_cont_300_bf_scaffold_951_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31026..31826
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXP0_9RHIZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KFC70773.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp.
short chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_951_29
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31887..32885
DNA (999bp) protein (333aa)
idhA; inositol 2-dehydrogenase (EC:1.1.1.18)
Putative dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YGZ3_9BRAD rbh
Putative dehydrogenase {ECO:0000313|EMBL:EHR02512.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
SCNpilot_cont_300_bf_scaffold_951_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32885..33667
DNA (783bp) protein (261aa)
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXK3_9RHIZ
Inositol-phosphate phosphatase {ECO:0000313|EMBL:KFC70775.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inositol monophosphatase
Displaying items 1-30 of 60 in total

View Taxonomy