ggKbase home page

SCNpilot_cont_300_bf_scaffold_2935

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2935_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..362)
DNA (360bp) protein (120aa)
(2Fe-2S)-binding domain protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VIF1_RHOPX
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:KFC67626.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea
(2Fe-2S)-binding domain-containing protein
SCNpilot_cont_300_bf_scaffold_2935_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

701..2032
DNA (1332bp) protein (444aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQS9_9SPHN
Putative bacterial chemotaxis sensory transducer {ECO:0000313|EMBL:KFC67627.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="B
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2935_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2090..2542)
DNA (453bp) protein (151aa)
Putative Carbon monoxide dehydrogenase, coxG accessory protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TMW6_9BRAD
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:KFC67628.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2935_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2742..3938
DNA (1197bp) protein (399aa)
UPI0003D063D8 related cluster n=1 Tax=unknown RepID=UPI0003D063D8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC67630.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2935_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3929..4363
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HP60_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC67631.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2935_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4411..4977)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000318D348
Flavin reductase-like, FMN-binding protein {ECO:0000313|EMBL:KFC67634.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea s
flavin reductase like domain protein
SCNpilot_cont_300_bf_scaffold_2935_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5448..6431
DNA (984bp) protein (328aa)
branched-chain amino acid transporter permease subunit LivH n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000315737A
Branched-chain amino acid ABC-type transport system permease component {ECO:0000313|EMBL:KFC67640.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
inner-membrane translocator
SCNpilot_cont_300_bf_scaffold_2935_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7061..7792
DNA (732bp) protein (244aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Rhodovulum sp. PH10 RepID=J6J047_9RHOB
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:KFC67641.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source
inner-membrane translocator
SCNpilot_cont_300_bf_scaffold_2935_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7792..8646
DNA (855bp) protein (285aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNW4_9RHIZ rbh
ABC transporter related protein {ECO:0000313|EMBL:KFC67642.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein
SCNpilot_cont_300_bf_scaffold_2935_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8649..9374
DNA (726bp) protein (242aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNW5_9RHIZ rbh
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:KFC67643.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bose
ABC transporter-like protein
SCNpilot_cont_300_bf_scaffold_2935_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9496..9870
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VZ76_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC67644.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2935_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10000..11115
DNA (1116bp) protein (372aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNW7_9RHIZ
Extracellular ligand-binding receptor {ECO:0000313|EMBL:KFC67645.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC
ABC-type branched-chain amino acid transport systems, periplasmic component
SCNpilot_cont_300_bf_scaffold_2935_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11234..12706)
DNA (1473bp) protein (491aa)
Putative Prolyl aminopeptidase {ECO:0000313|EMBL:KFC74005.1}; EC=3.4.11.5 {ECO:0000313|EMBL:KFC74005.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizob
prolyl aminopeptidase (EC:3.4.11.5)
Putative Prolyl aminopeptidase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EMR8_BRASB
SCNpilot_cont_300_bf_scaffold_2935_14
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12714..13460)
DNA (747bp) protein (249aa)
Metallophosphoesterase n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KIW3_9RHIZ
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AJY44750.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica
SCNpilot_cont_300_bf_scaffold_2935_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13467..14774)
DNA (1308bp) protein (436aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPM1_METNO
adenylosuccinate lyase
SCNpilot_cont_300_bf_scaffold_2935_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14858..15541)
DNA (684bp) protein (228aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhi
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNX3_9RHIZ rbh
SCNpilot_cont_300_bf_scaffold_2935_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15578..15943)
DNA (366bp) protein (122aa)
Putative glutathione S-transferase GSTF2 (GST-II) {ECO:0000313|EMBL:KFC67650.1}; EC=2.5.1.18 {ECO:0000313|EMBL:KFC67650.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizo
Glutathione S-transferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ58_9RHIZ
SCNpilot_cont_300_bf_scaffold_2935_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15919..16197)
DNA (279bp) protein (93aa)
Putative glutathione S-transferase GSTF2 (GST-II) {ECO:0000313|EMBL:KFC67650.1}; EC=2.5.1.18 {ECO:0000313|EMBL:KFC67650.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizo
Glutathione S-transferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ58_9RHIZ
glutathione S-transferase domain-containing protein
SCNpilot_cont_300_bf_scaffold_2935_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16242..17213)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000376F148
Uncharacterized protein {ECO:0000313|EMBL:KFC67651.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Sodium Bile acid symporter family protein
SCNpilot_cont_300_bf_scaffold_2935_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17492..18739
DNA (1248bp) protein (416aa)
D-amino-acid dehydrogenase {ECO:0000313|EMBL:KFC67652.1}; EC=1.4.99.1 {ECO:0000313|EMBL:KFC67652.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNX2_9RHIZ rbh
dadA; D-amino acid dehydrogenase small subunit
SCNpilot_cont_300_bf_scaffold_2935_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18850..19365
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030A3A3A
Membrane dipeptidase {ECO:0000313|EMBL:KFC67654.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dipeptidase
Displaying 21 items

View Taxonomy