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SCNpilot_cont_300_bf_scaffold_1257

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1257_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..550)
DNA (549bp) protein (183aa)
COGs COG0726 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK79_9PROT
Polysaccharide deacetylase {ECO:0000313|EMBL:KIO49477.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira s
polysaccharide deacetylase
SCNpilot_cont_300_bf_scaffold_1257_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(687..2018)
DNA (1332bp) protein (444aa)
O-antigen polymerase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCB3_NITMU rbh
Polymerase {ECO:0000313|EMBL:KIO49418.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
O-antigen polymerase
SCNpilot_cont_300_bf_scaffold_1257_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2138..2821)
DNA (684bp) protein (228aa)
adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-R
Adenylyl-sulfate kinase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCB4_NITMU rbh
SCNpilot_cont_300_bf_scaffold_1257_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3467..4441
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCB5_NITMU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73606.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
SCNpilot_cont_300_bf_scaffold_1257_5
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4594..5559)
DNA (966bp) protein (322aa)
Uncharacterized protein id=1896434 bin=GWE2_Gallionellales_58_10 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1257_6
unknown

Not on your lists

5568..5777
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1257_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5716..6657)
DNA (942bp) protein (314aa)
Glycosyl transferase, family 2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCB6_NITMU rbh
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABB73605.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrososp
SCNpilot_cont_300_bf_scaffold_1257_8
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6998..8008
DNA (1011bp) protein (337aa)
glycosyl transferase family 2 n=1 Tax=Pseudomonas sp. R81 RepID=UPI00029A6CA1 rbh
glycosyl transferase family 2
Tax=BJP_IG2158_Methylococcales_50_91
SCNpilot_cont_300_bf_scaffold_1257_9
Cyanothece sp. CCY0110, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8005..8694
DNA (690bp) protein (230aa)
sam-dependent methyltransferase (EC:2.1.1.-)
Sam-dependent methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSN6_9GAMM rbh
Methyltransferase 24 {ECO:0000313|EMBL:EAZ91309.1}; TaxID=391612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. CCY0110.;"
SCNpilot_cont_300_bf_scaffold_1257_10
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8712..9065
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WI04_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KES24570.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. A
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1257_11
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9190..11148
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSN4_9GAMM rbh
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EFV94689.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1257_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11151..12614)
DNA (1464bp) protein (488aa)
Polysaccharide biosynthesis protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCC1_NITMU rbh
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ABB73600.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitr
SCNpilot_cont_300_bf_scaffold_1257_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12744..14120)
DNA (1377bp) protein (459aa)
Coenzyme F390 synthetase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLK7_9PROT rbh
Capsule biosynthesis protein CapK {ECO:0000313|EMBL:KIO49422.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitroso
capsular polysaccharide biosynthesis protein CapK
SCNpilot_cont_300_bf_scaffold_1257_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14117..14788)
DNA (672bp) protein (224aa)
Glycosyl transferase, group 1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DXB2_9PROT
Glycosyl transferase family 1 {ECO:0000313|EMBL:KIO49423.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospir
group 1 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_1257_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14793..15134)
DNA (342bp) protein (114aa)
Glycosyl transferase, group 1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DXB2_9PROT
Glycosyl transferase, group 1 {ECO:0000313|EMBL:CCU63880.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrososp
group 1 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_1257_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15191..16411)
DNA (1221bp) protein (407aa)
Glycosyl transferase, group 1 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCC4_NITMU rbh
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABB73597.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospi
SCNpilot_cont_300_bf_scaffold_1257_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17099..18232)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PXU2_9RHOO
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1257_18
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(18332..20170)
DNA (1839bp) protein (613aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00035EE4AE
Carbamoyltransferase Tax=RBG_16_Zixibacteria_53_22_curated
carbamoyltransferase
SCNpilot_cont_300_bf_scaffold_1257_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20188..20337)
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Magnetospirillum RepID=M2YBX0_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1257_20
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20349..20768)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z869_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EME70505.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1257_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20968..22383)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK89_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63886.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1257_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23365..24045
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLQ0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49478.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1257_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24081..24332
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DMB3_9PROT
Acyl carrier protein {ECO:0000313|EMBL:KIO49429.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpA
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1257_24
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24491..25180
DNA (690bp) protein (230aa)
Esterase/lipase/thioesterase family active site protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCD9_NITMU
Esterase {ECO:0000313|EMBL:KIO49430.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
esterase/lipase/thioesterase family protein
SCNpilot_cont_300_bf_scaffold_1257_25
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25161..26048
DNA (888bp) protein (296aa)
Esterase/lipase/thioesterase family active site pseudogene n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLL5_9PROT
Hydrolase {ECO:0000313|EMBL:KIO49431.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
esterase/lipase/thioesterase family protein
SCNpilot_cont_300_bf_scaffold_1257_26
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26196..26813
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCE1_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73580.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
SCNpilot_cont_300_bf_scaffold_1257_27
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26875..27210)
DNA (336bp) protein (112aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CCU63892.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CCU63892.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadace
UDP-glucose 4-epimerase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLQ3_9PROT
NAD-dependent epimerase/dehydratase
Displaying 27 items

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