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SCNpilot_cont_300_bf_scaffold_458

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_458_1
unknown

Not on your lists

comp(180..455)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_458_2
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(459..1406)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000347FBF7
cysteine protease
Cysteine protease {ECO:0000313|EMBL:AFD07337.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (st
SCNpilot_cont_300_bf_scaffold_458_3
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

2177..2590
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QEB1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY57213.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
SCNpilot_cont_300_bf_scaffold_458_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2981..4987)
DNA (2007bp) protein (669aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales;
Glycogen debranching enzyme n=1 Tax=Nitrosospira sp. APG3 RepID=M5DRN1_9PROT rbh
glycogen debranching protein GlgX
SCNpilot_cont_300_bf_scaffold_458_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5425..6942
DNA (1518bp) protein (506aa)
FAD dependent oxidoreductase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8W9_NITMU rbh
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABB74802.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospir
SCNpilot_cont_300_bf_scaffold_458_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6902..7654)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8W8_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74803.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
SCNpilot_cont_300_bf_scaffold_458_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7917..9062
DNA (1146bp) protein (382aa)
Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DRN9_9PROT rbh
Diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:CCU62090.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitr
diguanylate cyclase
SCNpilot_cont_300_bf_scaffold_458_8
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9236..9505)
DNA (270bp) protein (90aa)
Uncharacterized conserved small protein-like protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV09_POLNA
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_458_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9502..10809)
DNA (1308bp) protein (436aa)
Conjugation TrbI family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV08_POLNA rbh
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
conjugation TrbI family protein
SCNpilot_cont_300_bf_scaffold_458_10
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10812..11825)
DNA (1014bp) protein (338aa)
Conjugal transfer protein TrbG/VirB9/CagX n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV07_POLNA rbh
conjugal transfer protein TrbG/VirB9/CagX
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:ABM39485.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polarom
SCNpilot_cont_300_bf_scaffold_458_11
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11822..12526)
DNA (705bp) protein (235aa)
Conjugal transfer protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV06_POLNA rbh
conjugal transfer protein TrbF
Conjugal transfer protein {ECO:0000313|EMBL:ABM39484.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="
SCNpilot_cont_300_bf_scaffold_458_12
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12539..13924)
DNA (1386bp) protein (462aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV05_POLNA rbh
conjugal transfer protein TrbL
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ABM39483.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="
SCNpilot_cont_300_bf_scaffold_458_13
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13934..14662)
DNA (729bp) protein (243aa)
Putative conjugal transfer TrbJ signal peptide protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV04_POLNA rbh
conjugal transfer protein TrbJ
Putative conjugal transfer TrbJ signal peptide protein {ECO:0000313|EMBL:ABM39482.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
SCNpilot_cont_300_bf_scaffold_458_14
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14659..17097)
DNA (2439bp) protein (813aa)
AAA ATPase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV03_POLNA rbh
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4 Tax=GWA2_Burkholderiales_64_37_curated
conjugal transfer ATPase TrbE
SCNpilot_cont_300_bf_scaffold_458_15
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17119..17379)
DNA (261bp) protein (87aa)
Putative conjugal transfer TrbD transmembrane protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV02_POLNA
putative conjugal transfer TrbD transmembrane protein
Putative conjugal transfer TrbD transmembrane protein {ECO:0000313|EMBL:ABM39480.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;"
SCNpilot_cont_300_bf_scaffold_458_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17376..17744)
DNA (369bp) protein (123aa)
Conjugal transfer protein TrbC n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV01_POLNA
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 Tax=GWA2_Burkholderiales_64_37_curated
conjugal transfer protein TrbC
SCNpilot_cont_300_bf_scaffold_458_17
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17741..18790)
DNA (1050bp) protein (350aa)
Type II secretion system protein E n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV00_POLNA rbh
type II secretion system protein E; K03196 type IV secretion system protein VirB11 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
type II secretion system protein E
SCNpilot_cont_300_bf_scaffold_458_18
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18787..19239)
DNA (453bp) protein (151aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ9_POLNA
CopG/DNA-binding domain-containing protein
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:ABM39477.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source
SCNpilot_cont_300_bf_scaffold_458_19
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19236..21227)
DNA (1992bp) protein (664aa)
TRAG family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ8_POLNA rbh
conjugal transfer coupling protein TraG
TRAG family protein {ECO:0000313|EMBL:ABM39476.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivo
SCNpilot_cont_300_bf_scaffold_458_20
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21514..21756)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ7_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39475.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Po
SCNpilot_cont_300_bf_scaffold_458_21
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21768..22679)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ6_POLNA rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM39474.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaro
SCNpilot_cont_300_bf_scaffold_458_22
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22742..22981)
DNA (240bp) protein (80aa)
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_cont_300_bf_scaffold_458_23
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23088..24320)
DNA (1233bp) protein (411aa)
Major facilitator transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX4_9GAMM rbh
major Facilitator Superfamily protein
Major Facilitator Superfamily protein {ECO:0000313|EMBL:AJZ56350.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
SCNpilot_cont_300_bf_scaffold_458_24
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24357..25055)
DNA (699bp) protein (233aa)
Putative cytochrome c biogenesis protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX3_9GAMM
cytochrome C biogenesis transmembrane region family protein
Cytochrome C biogenesis transmembrane region family protein {ECO:0000313|EMBL:AJZ56257.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkho
SCNpilot_cont_300_bf_scaffold_458_25
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25139..25411)
DNA (273bp) protein (91aa)
Thioredoxin/glutaredoxin n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX2_9GAMM
glutaredoxin family protein
Glutaredoxin family protein {ECO:0000313|EMBL:AJZ56031.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia f
SCNpilot_cont_300_bf_scaffold_458_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25427..25978)
DNA (552bp) protein (184aa)
MerR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX1_9GAMM
MerR family transcriptional regulator {ECO:0000313|EMBL:EIL86812.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
merR regulatory family protein
SCNpilot_cont_300_bf_scaffold_458_27
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26068..26295)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX0_9GAMM
heavy-metal-associated domain protein
Heavy-metal-associated domain protein {ECO:0000313|EMBL:AJZ56452.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
SCNpilot_cont_300_bf_scaffold_458_28
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26380..28836)
DNA (2457bp) protein (819aa)
copper-translocating P-type ATPase (EC:3.6.3.4) rbh
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AJZ56232.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AJZ56232.1};; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkho
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHW9_9GAMM rbh
SCNpilot_cont_300_bf_scaffold_458_29
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29071..29499)
DNA (429bp) protein (143aa)
Transcriptional regulator, MerR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9Y6_ALIDK
MerR family transcriptional regulator Tax=CG_Rhodocyc_01
MerR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_458_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29570..29920
DNA (351bp) protein (117aa)
Mercuric transport protein n=10 Tax=Proteobacteria RepID=MERT_ALCSP
mercuric transport protein
Mercuric transport protein {ECO:0000313|EMBL:AIX66999.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
Displaying items 1-30 of 60 in total

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