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SCNpilot_cont_300_bf_scaffold_819

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_819_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33..704)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIE7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49208.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_819_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(749..1861)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DII7_9PROT rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:KIO49205.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitroso
hypothetical protein
SCNpilot_cont_300_bf_scaffold_819_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1999..2367)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGM7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62416.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
SCNpilot_cont_300_bf_scaffold_819_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2758..5475
DNA (2718bp) protein (906aa)
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83)
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:ABB75061.1}; EC=2.4.1.83 {ECO:0000313|EMBL:ABB75061.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomona
Dolichyl-phosphate beta-D-mannosyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y860_NITMU rbh
SCNpilot_cont_300_bf_scaffold_819_5
unknown

Not on your lists

5459..5596
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_819_6
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5770..6099
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037CBFBC
Thioredoxin {ECO:0000313|EMBL:KIF83151.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
thioredoxin
SCNpilot_cont_300_bf_scaffold_819_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6248..6688)
DNA (441bp) protein (147aa)
Heat shock protein, Hsp20 family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGM4_9PROT
Heat shock protein, Hsp20 family {ECO:0000313|EMBL:CCU62411.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitros
heat shock protein Hsp20
SCNpilot_cont_300_bf_scaffold_819_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6880..7929)
DNA (1050bp) protein (350aa)
beta-hexosaminidase (EC:3.2.1.52)
Beta-hexosaminidase {ECO:0000255|HAMAP-Rule:MF_00364}; EC=3.2.1.52 {ECO:0000255|HAMAP-Rule:MF_00364};; Beta-N-acetylhexosaminidase {ECO:0000255|HAMAP-Rule:MF_00364}; N-acetyl-beta-glucosaminidase {ECO
Beta-hexosaminidase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=NAGZ_NITMU rbh
SCNpilot_cont_300_bf_scaffold_819_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8011..8388)
DNA (378bp) protein (126aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIV3_9PROT
SCNpilot_cont_300_bf_scaffold_819_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8385..9110)
DNA (726bp) protein (242aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
Pyridoxine 5'-phosphate synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DII0_9PROT rbh
pyridoxine 5'-phosphate synthase
SCNpilot_cont_300_bf_scaffold_819_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9342..9719
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y866_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75055.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
SCNpilot_cont_300_bf_scaffold_819_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9869..10597)
DNA (729bp) protein (243aa)
DNA repair protein RecO n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGL3_9PROT rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1288494 species="Bacteria; Proteobacteria; Be
recO; DNA repair protein RecO
SCNpilot_cont_300_bf_scaffold_819_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10635..11576)
DNA (942bp) protein (314aa)
GTPase Era n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSM4_9PROT rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" s
era; GTP-binding protein Era
SCNpilot_cont_300_bf_scaffold_819_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11628..12308)
DNA (681bp) protein (227aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:00
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIC9_9PROT rbh
SCNpilot_cont_300_bf_scaffold_819_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12396..13199)
DNA (804bp) protein (268aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadacea
peptidase S26A, signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIU1_9PROT rbh
SCNpilot_cont_300_bf_scaffold_819_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13248..15041)
DNA (1794bp) protein (598aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIH0_9PROT rbh
GTP-binding protein LepA
SCNpilot_cont_300_bf_scaffold_819_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15236..15502)
DNA (267bp) protein (89aa)
Glutaredoxin 2 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGK9_9PROT
Glutaredoxin 2 {ECO:0000313|EMBL:CCU62391.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
glutaredoxin 2
SCNpilot_cont_300_bf_scaffold_819_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15492..16907)
DNA (1416bp) protein (472aa)
Serine protease MucD/AlgY associated with sigma factor RpoE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSM0_9PROT rbh
Serine protease MucD/AlgY associated with sigma factor RpoE {ECO:0000313|EMBL:CCU62390.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nit
peptidase S1C, Do
SCNpilot_cont_300_bf_scaffold_819_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17192..18202)
DNA (1011bp) protein (337aa)
Sigma E regulatory protein, MucB/RseB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y876_NITMU rbh
sigma E regulatory protein, MucB/RseB
Sigma E regulatory protein, MucB/RseB {ECO:0000313|EMBL:ABB75045.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitroso
SCNpilot_cont_300_bf_scaffold_819_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18199..18762)
DNA (564bp) protein (188aa)
Sigma factor RpoE negative regulatory protein RseA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIT8_9PROT
Sigma factor RpoE negative regulatory protein RseA {ECO:0000313|EMBL:CCU62388.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira
anti sigma-E protein RseA
SCNpilot_cont_300_bf_scaffold_819_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18764..19366)
DNA (603bp) protein (201aa)
RNA polymerase sigma factor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIG8_9PROT rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrososp
RNA polymerase sigma factor RpoE
SCNpilot_cont_300_bf_scaffold_819_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19655..21268
DNA (1614bp) protein (538aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:KIO49186.1}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:KIO49186.1};; TaxID=58133 species="Bacteria; Proteobacter
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGK4_9PROT rbh
SCNpilot_cont_300_bf_scaffold_819_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21308..21748)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSL0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49182.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_819_24
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21745..22677)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIB9_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU62379.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
SCNpilot_cont_300_bf_scaffold_819_25
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22772..23566)
DNA (795bp) protein (265aa)
Possible ubiE ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820A0_NITEU rbh
Ubiquinone biosynthesis protein UbiE {ECO:0000313|EMBL:KIO49161.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitr
ubiquinone/menaquinone biosynthesis methlytransferase UbiE
SCNpilot_cont_300_bf_scaffold_819_26
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23845..24477)
DNA (633bp) protein (211aa)
Putative Zn-dependent hydrolase of beta-lactamase fold protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CEN6_DESTA
putative Zn-dependent hydrolase of beta-lactamase fold protein
Putative Zn-dependent hydrolase of beta-lactamase fold protein {ECO:0000313|EMBL:AFM28027.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; D
SCNpilot_cont_300_bf_scaffold_819_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24488..25114)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7P3_NITMU rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO49162.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_819_28
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25139..25804)
DNA (666bp) protein (222aa)
Transcriptional regulator, TetR family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7P4_NITMU rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KIO49163.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nit
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_819_29
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25806..27035)
DNA (1230bp) protein (410aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TE8_NITEU rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CAD85856.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitr
SCNpilot_cont_300_bf_scaffold_819_30
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27054..27605)
DNA (552bp) protein (184aa)
OsmC family protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AIX6_NITEC
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:ABI58695.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutroph
Displaying items 1-30 of 33 in total

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