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SCNpilot_cont_300_bf_scaffold_2316

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2316_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..703)
DNA (702bp) protein (234aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III epsilon subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHF5_9PROT rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KIO48466.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitros
SCNpilot_cont_300_bf_scaffold_2316_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(765..1277)
DNA (513bp) protein (171aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHW6_9PROT
ribonuclease H
SCNpilot_cont_300_bf_scaffold_2316_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1274..2056)
DNA (783bp) protein (261aa)
FIG005121: SAM-dependent methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHL3_9PROT rbh
FIG005121: SAM-dependent methyltransferase {ECO:0000313|EMBL:CCU61987.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sour
generic methyl-transferase
SCNpilot_cont_300_bf_scaffold_2316_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2197..2988
DNA (792bp) protein (264aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFK8_9PROT rbh
SCNpilot_cont_300_bf_scaffold_2316_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3143..3343)
DNA (201bp) protein (67aa)
Transcriptional regulator, XRE family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y595_NITMU
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABB76076.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Ni
SCNpilot_cont_300_bf_scaffold_2316_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3824..4942
DNA (1119bp) protein (373aa)
transaldolase (EC:2.2.1.2)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=323848 species="Bacteria; Proteobact
Transaldolase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J8_NITMU rbh
SCNpilot_cont_300_bf_scaffold_2316_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5037..5942
DNA (906bp) protein (302aa)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHF0_9PROT rbh
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:KIO48470.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosos
6-phosphogluconate dehydrogenase-like protein
SCNpilot_cont_300_bf_scaffold_2316_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6172..6600
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG35_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48329.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2316_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6902..7306
DNA (405bp) protein (135aa)
DoxX family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHV7_9PROT
GntR family transcriptional regulator {ECO:0000313|EMBL:KIO48476.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nit
DoxX
SCNpilot_cont_300_bf_scaffold_2316_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7808..8509
DNA (702bp) protein (234aa)
6-phosphogluconolactonase {ECO:0000313|EMBL:ABB74928.1}; EC=3.1.1.31 {ECO:0000313|EMBL:ABB74928.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonada
6-phosphogluconolactonase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J3_NITMU rbh
6-phosphogluconolactonase
SCNpilot_cont_300_bf_scaffold_2316_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8622..9260)
DNA (639bp) protein (213aa)
Transcriptional regulator n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J2_NITMU rbh
putative transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABB74929.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira m
SCNpilot_cont_300_bf_scaffold_2316_12
unknown

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9471..9569
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2316_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9752..10597)
DNA (846bp) protein (282aa)
N-acyl homoserine lactone hydrolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHE2_9PROT rbh
Beta-lactamase {ECO:0000313|EMBL:KIO48479.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
putative AHL-lactonase
SCNpilot_cont_300_bf_scaffold_2316_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10770..11978
DNA (1209bp) protein (403aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1288494 species="Bacteria; Proteobac
talA; bifunctional transaldolase/phosoglucose isomerase (EC:2.2.1.2)
Transaldolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHV3_9PROT
SCNpilot_cont_300_bf_scaffold_2316_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11949..12203)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8I9_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74932.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
Displaying 15 items

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