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SCNpilot_cont_300_bf_scaffold_1232_1

Organism: SCNPILOT_CONT_300_BF_Nitrosospira_56_141

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 136..408

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU-beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL13_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 90.0
  • Bit_score: 165
  • Evalue 2.10e-38
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:KIO49249.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 90.0
  • Bit_score: 164
  • Evalue 8.40e-38
histone-like DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 90.0
  • Bit_score: 153
  • Evalue 3.90e-35

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTGAATAAATCTGAACTGATCGACGCCATCGCCAAGTCTTCCGATATTTCAAAAGCCTCTGCCGGTAGCGCGCTGGACGGGGCACTCAATGCAATTAAAGCCGCCCTTAAAAAAGGCCAGAGCGTGACGCTTGTCGGATTCGGGACCTTTCGGGTGGGAAAGCGCGCTGCCCGTACTGGCCGCAATCCACGCACCGGAGCTGCGATCAAGATTAAAGCCGCCAAGGTGCCGAAATTCACCGCTGGCAAGGCACTCAAGGATGCAGTAAACTAG
PROTEIN sequence
Length: 91
VNKSELIDAIAKSSDISKASAGSALDGALNAIKAALKKGQSVTLVGFGTFRVGKRAARTGRNPRTGAAIKIKAAKVPKFTAGKALKDAVN*