ggKbase home page

SCNpilot_cont_300_bf_scaffold_1232

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1232_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136..408
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL13_9PROT
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:KIO49249.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source
histone-like DNA-binding protein
SCNpilot_cont_300_bf_scaffold_1232_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

654..2501
DNA (1848bp) protein (616aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148, ECO:0000313|EMBL:KIO49248.1}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; N
Peptidyl-prolyl cis-trans isomerase PpiD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWH4_9PROT rbh
PpiC-type peptidyl-prolyl cis-trans isomerase
SCNpilot_cont_300_bf_scaffold_1232_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2511..3389)
DNA (879bp) protein (293aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitroso
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJN9_9PROT rbh
Short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_1232_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3432..5663
DNA (2232bp) protein (744aa)
Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLS7_9PROT rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIO49454.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;"
extracellular solute-binding protein
SCNpilot_cont_300_bf_scaffold_1232_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5656..6633
DNA (978bp) protein (326aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6J7_NITMU rbh
binding-protein dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABB75624.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadac
SCNpilot_cont_300_bf_scaffold_1232_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6652..8139
DNA (1488bp) protein (496aa)
Oligopeptide transport system permease protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWI4_9PROT rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:KIO49245.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosos
binding-protein dependent transport system inner membrane protein
SCNpilot_cont_300_bf_scaffold_1232_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8153..10288
DNA (2136bp) protein (712aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6J9_NITMU rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIO49244.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitro
oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein
SCNpilot_cont_300_bf_scaffold_1232_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10306..11916
DNA (1611bp) protein (537aa)
Peptide chain release factor 3 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6K0_NITMU rbh
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=323848 species="Bacteria; Proteobacteria; Betaprot
SCNpilot_cont_300_bf_scaffold_1232_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12189..13535
DNA (1347bp) protein (449aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLT1_9PROT rbh
SCNpilot_cont_300_bf_scaffold_1232_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13551..14453
DNA (903bp) protein (301aa)
Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL20_9PROT rbh
Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation {ECO:0000313|EMBL:CCU63644.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales;
fructosamine kinase
SCNpilot_cont_300_bf_scaffold_1232_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14560..16812)
DNA (2253bp) protein (751aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=58133 species="Bacteria; Pr
Replication restart DNA helicase PriA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6K3_NITMU rbh
primosomal protein N'
Displaying 11 items

View Taxonomy