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SCNpilot_cont_300_bf_scaffold_1269_14

Organism: SCNPILOT_CONT_300_BF_Nitrosospira_56_141

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 14847..15443

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI0003653D2B similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 196.0
  • Bit_score: 292
  • Evalue 4.20e-76
Transposase {ECO:0000313|EMBL:AKH21145.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 193.0
  • Bit_score: 310
  • Evalue 1.60e-81
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 196.0
  • Bit_score: 290
  • Evalue 3.40e-76

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Taxonomy

Sedimenticola sp. SIP-G1 → Sedimenticola → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGCCTTATAACCATAAGCGGGTGTATCGCATCTATCGGCAACTGGAGCTGAATTTGCGCATCAAGCCGAAGCGACGACTGAAGCGGGACAAGTCGCAGGCCTTGACGGTGCCGCAACGGATCAATGAAGTCTGGTCGATGGATTTCATGCATGATGCCTTGTCGGATGGCCGCAGCTTTCGCACCTTTAACGTGATCGATGACTTCAACCGCGAGGGGCTAGGCATCGAAGTGGATCTCTCCCTGCCTTCCGCCCCCATCATCCGGGCACTGGGGCATATTATCGAATGGCGCGGAAAACCAAAAGTGCTTCGGCTGGATAACGGCCCTGAGCACATCAGTCACGAGTTCCGCCAGTGGGCAGAAAGCCAGGGAATCGAGTTGCGGTTTATCCAGCCTGGCAAACCTGCGCAAAATGCCTATGCGGAACGATTCAATCGTACTGTGCGGCATGAATGGCTGGATCAGACAATCTTCCAGTCAATAGCACATGCACAGGAAACCGCAACACAATGGCTATGGCGTTACAATGCGCAACGACCCAATACCGCCATCGGCGGGCTAACACCCTATCAGAAGTTGGCAATGGTCGTCTGA
PROTEIN sequence
Length: 199
MPYNHKRVYRIYRQLELNLRIKPKRRLKRDKSQALTVPQRINEVWSMDFMHDALSDGRSFRTFNVIDDFNREGLGIEVDLSLPSAPIIRALGHIIEWRGKPKVLRLDNGPEHISHEFRQWAESQGIELRFIQPGKPAQNAYAERFNRTVRHEWLDQTIFQSIAHAQETATQWLWRYNAQRPNTAIGGLTPYQKLAMVV*