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SCNpilot_cont_300_bf_scaffold_1269

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1269_1
unknown

Not on your lists

493..657
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1269_2
unknown

Not on your lists

670..1242
DNA (573bp) protein (191aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1269_3
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1370..1648)
DNA (279bp) protein (93aa)
Transposase family protein n=2 Tax=Pseudomonas RepID=I4JKL3_PSEST
Transposase {ECO:0000313|EMBL:GAO37575.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
transposase IS3/IS911 family protein
SCNpilot_cont_300_bf_scaffold_1269_4
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1926..2711
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00036C7C26 rbh
rkpT1; ABC transporter; K09688 capsular polysaccharide transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
ABC-type polysaccharide/polyol phosphate export system, permease component
SCNpilot_cont_300_bf_scaffold_1269_5
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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2708..3373
DNA (666bp) protein (222aa)
sugar ABC transporter ATPase n=1 Tax=Brachymonas chironomi RepID=UPI00035C208F rbh
rkpS; sugar ABC transporter ATPase; K09689 capsular polysaccharide transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
SCNpilot_cont_300_bf_scaffold_1269_6
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3370..4512
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037B0864 rbh
capsule polysaccharide exportinner-membrane protein; K10107 capsular polysaccharide transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
capsule polysaccharide exportinner-membrane protein
SCNpilot_cont_300_bf_scaffold_1269_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4517..6424
DNA (1908bp) protein (636aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003676C69 rbh
polysaccharide export protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
periplasmic protein involved in polysaccharide export
SCNpilot_cont_300_bf_scaffold_1269_8
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6503..10546
DNA (4044bp) protein (1348aa)
Glycosyl transferase family 2 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0V1_HALNC rbh
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
family 2 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_1269_9
Halomonas sp. KO116, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10608..11627
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000362A18C
Chondroitin 4-O-sulfotransferase
Chondroitin 4-O-sulfotransferase {ECO:0000313|EMBL:AJY51404.1}; TaxID=1504981 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas
SCNpilot_cont_300_bf_scaffold_1269_10
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11714..12763
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036C0905
Uncharacterized protein {ECO:0000313|EMBL:EWM11742.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1269_11
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12848..13690
DNA (843bp) protein (281aa)
Type 11 methyltransferase n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9W4Q5_9CYAN
Type 11 methyltransferase {ECO:0000313|EMBL:ESA35046.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J
type 11 methyltransferase
SCNpilot_cont_300_bf_scaffold_1269_12
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13799..14239)
DNA (441bp) protein (147aa)
Integrase core domain protein n=2 Tax=Burkholderia multivorans RepID=B9BQM8_9BURK
Integrase core domain protein {ECO:0000313|EMBL:EEE06923.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia c
integrase core domain protein
SCNpilot_cont_300_bf_scaffold_1269_13
Xenorhabdus nematophila, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14424..14687
DNA (264bp) protein (88aa)
Low calcium response locus protein S n=1 Tax=Xenorhabdus nematophila F1 RepID=N1NN38_XENNE
Low calcium response locus protein S {ECO:0000313|EMBL:CCW30108.1}; TaxID=1306162 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="
Low calcium response locus protein S
SCNpilot_cont_300_bf_scaffold_1269_14
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14847..15443
DNA (597bp) protein (199aa)
integrase n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI0003653D2B
Transposase {ECO:0000313|EMBL:AKH21145.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
integrase catalytic subunit
SCNpilot_cont_300_bf_scaffold_1269_15
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15795..16205)
DNA (411bp) protein (137aa)
Phage terminase small subunit n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MCC6_BORPB
phage terminase small subunit
Phage terminase small subunit {ECO:0000313|EMBL:CCJ48959.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella para
SCNpilot_cont_300_bf_scaffold_1269_16
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16509..18785)
DNA (2277bp) protein (759aa)
Virulence-associated E family protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T9G2_ALCXX rbh
Virulence-associated E family protein {ECO:0000313|EMBL:EGP43122.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achr
virulence-associated E family protein
SCNpilot_cont_300_bf_scaffold_1269_17
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18799..19020)
DNA (222bp) protein (74aa)
Prophage CP4-57 regulatory n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHV3_GALCS
prophage CP4-57 regulatory
Prophage CP4-57 regulatory {ECO:0000313|EMBL:ADL56043.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsif
SCNpilot_cont_300_bf_scaffold_1269_18
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19159..19911)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6ZVU2_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC32908.1}; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
SCNpilot_cont_300_bf_scaffold_1269_19
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

comp(20020..21255)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI000362366B rbh
phage integrase Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
phage integrase
SCNpilot_cont_300_bf_scaffold_1269_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21587..21877)
DNA (291bp) protein (97aa)
Putative plasmid stabilization element ParE n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XK4_NITEU
Plasmid stabilization protein ParE {ECO:0000313|EMBL:KIO48297.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitros
plasmid stabilization element ParE
SCNpilot_cont_300_bf_scaffold_1269_21
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21878..22120)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XK3_NITEU
Antitoxin {ECO:0000313|EMBL:KIO48298.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1269_22
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22246..22497
DNA (252bp) protein (84aa)
Fic family protein (Filamentation induced by cAMP) n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAC0_METSZ
Fic family protein (Filamentation induced by cAMP) {ECO:0000313|EMBL:CCD31925.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" s
AsnC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1269_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22628..22735)
DNA (108bp) protein (36aa)
Relaxase {ECO:0000313|EMBL:KIO48299.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_300_bf_scaffold_1269_24
unknown

Not on your lists

22803..22880
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 24 items

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