ggKbase home page

SCNpilot_cont_300_bf_scaffold_1341_16

Organism: SCNPILOT_CONT_300_BF_Nitrosospira_56_141

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(17881..18207)

Top 3 Functional Annotations

Value Algorithm Source
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacill similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 108.0
  • Bit_score: 180
  • Evalue 1.80e-42
mRNA interferase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JME2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 108.0
  • Bit_score: 178
  • Evalue 3.70e-42
transcriptional modulator of MazE/toxin, MazF similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 108.0
  • Bit_score: 178
  • Evalue 1.00e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidithiobacillus ferrivorans → Acidithiobacillus → Acidithiobacillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGAAACGCGGTGAAGTGTGGTGGGTGGAATTTGACCCTGCGGTCGGAAGCAAGGTTCGTAAGACGCGACCCGCTGTTGTCGTCAGCAATGACGCTGCCAACCGAAATCTCGCACGCGTTGTCGTAATCCCCTTGACCAGCAACACGACCCGTCAATATCCTGGCGAAGCATTAGTGACCATAAATGGAAAGCAGGGTAAGGTAACGGCCGATCAGATCATGGCCTCAGATAAAATTCGCTTGAAAAACCGGCTTGGCATCCTGTCAAAGATCGATATGCTGGCTGTGGAAGATGCAATCCTGATTCATCTGGGGATGCCTAGATAA
PROTEIN sequence
Length: 109
MKRGEVWWVEFDPAVGSKVRKTRPAVVVSNDAANRNLARVVVIPLTSNTTRQYPGEALVTINGKQGKVTADQIMASDKIRLKNRLGILSKIDMLAVEDAILIHLGMPR*