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SCNpilot_cont_300_bf_scaffold_1341

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1341_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(432..1619)
DNA (1188bp) protein (396aa)
Putative signal peptide protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSJ5_9PROT rbh
Putative signal peptide protein {ECO:0000313|EMBL:CCU62360.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitroso
BNR repeat-containing glycosyl hydrolase
SCNpilot_cont_300_bf_scaffold_1341_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1717..2562)
DNA (846bp) protein (282aa)
RIO-like kinase n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GKU7_NITSI
Kinase {ECO:0000313|EMBL:KIO50257.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
RIO-like kinase
SCNpilot_cont_300_bf_scaffold_1341_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2948..4198)
DNA (1251bp) protein (417aa)
Proton/glutamate symport protein @ Sodium/glutamate symport protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFR0_9PROT rbh
Proton/glutamate symport protein @ Sodium/glutamate symport protein {ECO:0000313|EMBL:CCU62066.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadac
Sodium:dicarboxylate symporter
SCNpilot_cont_300_bf_scaffold_1341_4
unknown

Not on your lists

4213..4533
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1341_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4549..5547
DNA (999bp) protein (333aa)
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHM8_9PROT rbh
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:CCU62064.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadac
glycosyl transferase family protein
SCNpilot_cont_300_bf_scaffold_1341_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5549..7522
DNA (1974bp) protein (658aa)
UDP-N-acetylglucosamine 4,6-dehydratase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI20_9PROT rbh
UDP-N-acetylglucosamine 4,6-dehydratase {ECO:0000313|EMBL:CCU62063.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source=
polysaccharide biosynthesis protein CapD
SCNpilot_cont_300_bf_scaffold_1341_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7575..9380)
DNA (1806bp) protein (602aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Ni
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHT3_9PROT rbh
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
SCNpilot_cont_300_bf_scaffold_1341_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9488..11452)
DNA (1965bp) protein (655aa)
TonB-dependent receptor n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBD6_NITMU rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABB73935.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
SCNpilot_cont_300_bf_scaffold_1341_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12115..12324
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHM1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62059.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1341_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12329..12619
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI17_9PROT
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospi
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1341_11
unknown

Not on your lists

comp(13134..13721)
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1341_12
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14123..14509
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHS8_9PROT
Amidohydrolase {ECO:0000313|EMBL:KIO50263.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
amidohydrolase 2
SCNpilot_cont_300_bf_scaffold_1341_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14967..16247)
DNA (1281bp) protein (427aa)
Poly-gamma-glutamate synthesis protein / capsule biosynthesis protein capA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFQ2_9PROT rbh
Poly-gamma-glutamate synthesis protein / capsule biosynthesis protein capA {ECO:0000313|EMBL:CCU62056.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitroso
poly-gamma-glutamate synthesis protein
SCNpilot_cont_300_bf_scaffold_1341_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16466..16906
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHL7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50273.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1341_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17019..17888
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI15_9PROT rbh
Membrane protein {ECO:0000313|EMBL:KIO50274.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1341_16
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17881..18207)
DNA (327bp) protein (109aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacill
mRNA interferase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JME2_9GAMM
transcriptional modulator of MazE/toxin, MazF
SCNpilot_cont_300_bf_scaffold_1341_17
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18194..18424)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVY1_9BACT
Addiction module protein
Plasmid pAcX50a, complete sequence {ECO:0000313|EMBL:AJE23470.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotob
SCNpilot_cont_300_bf_scaffold_1341_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18552..19397)
DNA (846bp) protein (282aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHS4_9PROT rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase
SCNpilot_cont_300_bf_scaffold_1341_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19410..20636)
DNA (1227bp) protein (409aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase ATPase subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFP8_9PROT rbh
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
SCNpilot_cont_300_bf_scaffold_1341_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20651..21142)
DNA (492bp) protein (164aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBF4_NITMU
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
SCNpilot_cont_300_bf_scaffold_1341_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21160..21606)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHL1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62049.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
phosphate-starvation-inducible E
SCNpilot_cont_300_bf_scaffold_1341_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21834..22640)
DNA (807bp) protein (269aa)
HAD-superfamily hydrolase subfamily IA, variant 3 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBF6_NITMU rbh
HAD family hydrolase
HAD-superfamily hydrolase subfamily IA, variant 3 {ECO:0000313|EMBL:ABB73915.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;
SCNpilot_cont_300_bf_scaffold_1341_23
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22827..23819)
DNA (993bp) protein (331aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synth
YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (T(6)A) formation in tRNA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHR8_9PROT rbh
Sua5/YciO/YrdC/YwlC
SCNpilot_cont_300_bf_scaffold_1341_24
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23944..24696)
DNA (753bp) protein (251aa)
Endonuclease/Exonuclease/phosphatase family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFP5_9PROT rbh
Endonuclease/Exonuclease/phosphatase family protein {ECO:0000313|EMBL:CCU62046.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospir
endonuclease/exonuclease/phosphatase
SCNpilot_cont_300_bf_scaffold_1341_25
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24889..25989)
DNA (1101bp) protein (367aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569, ECO:0000256|SAAS:SAAS00096027};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacter
Quinolinate synthase A n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI06_9PROT rbh
quinolinate synthetase
SCNpilot_cont_300_bf_scaffold_1341_26
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26302..26796)
DNA (495bp) protein (165aa)
Dihydroneopterin triphosphate pyrophosphatase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBG0_NITMU
ntpA; dATP pyrophosphohydrolase
Dihydroneopterin triphosphate pyrophosphatase {ECO:0000313|EMBL:ABB73911.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" so
SCNpilot_cont_300_bf_scaffold_1341_27
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26847..28628)
DNA (1782bp) protein (594aa)
Aspartyl-tRNA synthetase @ Aspartyl-tRNA(Asn) synthetase {ECO:0000313|EMBL:CCU62041.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CCU62041.1};; EC=6.1.1.23 {ECO:0000313|EMBL:CCU62041.1};; TaxID=1288494 species="B
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFP2_9PROT rbh
SCNpilot_cont_300_bf_scaffold_1341_28
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28659..29414)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBG2_NITMU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73909.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
SCNpilot_cont_300_bf_scaffold_1341_29
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29353..29649)
DNA (297bp) protein (99aa)
Type I antifreeze protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHJ8_9PROT
Type I antifreeze protein {ECO:0000313|EMBL:CCU62039.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira
type I antifreeze protein
SCNpilot_cont_300_bf_scaffold_1341_30
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29918..30253)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBG4_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73907.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
Displaying items 1-30 of 34 in total

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