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SCNpilot_cont_300_bf_scaffold_1449_7

Organism: SCNPILOT_CONT_300_BF_Nitrosospira_56_141

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 9685..9969

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLI7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 94.0
  • Bit_score: 182
  • Evalue 2.20e-43
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrososp similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 94.0
  • Bit_score: 182
  • Evalue 3.10e-43
rpsR; 30S ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 94.0
  • Bit_score: 169
  • Evalue 4.20e-40

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGGCGCGTTTTACGTCAAAGCGAAAAGACAGCAAGGATAAAGAGAAGGAAAAGAAAGCAAGCAGGCCGCTGTTCAAGCGCAGGAAATTCTGCCGCTTCACGGCGGAGGGCATCAAGACCGTGGATTACAAGGATATCGAGCTGCTGAAGGATTTCATCAACGAAAACGGCAGAATCATTCCTGCACGCATAACCGGAACCAAGTCGCGTTACCAGCGCCAGTTGGGCGTTGCCATCGAGCGTGCACGTTTTCTGGCGCTGCTTCCGTATACCGACTTGCACTGA
PROTEIN sequence
Length: 95
MARFTSKRKDSKDKEKEKKASRPLFKRRKFCRFTAEGIKTVDYKDIELLKDFINENGRIIPARITGTKSRYQRQLGVAIERARFLALLPYTDLH*