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SCNpilot_cont_300_bf_scaffold_1106

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1106_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..676
DNA (675bp) protein (225aa)
UPI0003D02FBA related cluster n=1 Tax=unknown RepID=UPI0003D02FBA
Porin omp2b {ECO:0000313|EMBL:CDX18944.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
porin
SCNpilot_cont_300_bf_scaffold_1106_2
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

923..1993
DNA (1071bp) protein (357aa)
integrase n=1 Tax=Rhizobium loti RepID=UPI00035EAB47 rbh
Integrase {ECO:0000313|EMBL:CDX22410.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
integrase rbh
SCNpilot_cont_300_bf_scaffold_1106_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2275..3171)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y2Z8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX19052.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1106_4
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3379..5421)
DNA (2043bp) protein (681aa)
lytic transglycosylase n=1 Tax=Rhizobium loti RepID=UPI00037275D3 rbh
Transglycosylase SLT domain protein {ECO:0000313|EMBL:AID29017.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh
soluble lytic murein transglycosylase precursor rbh
SCNpilot_cont_300_bf_scaffold_1106_5
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5657..6538
DNA (882bp) protein (294aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52) rbh
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=266835 species
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Rhizobium loti (strain MAFF303099) RepID=DAPA_RHILO rbh
SCNpilot_cont_300_bf_scaffold_1106_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6564..7043
DNA (480bp) protein (160aa)
SsrA-binding protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y7D5_MESOW
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobiu
SsrA-binding protein
SCNpilot_cont_300_bf_scaffold_1106_7
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7138..7848
DNA (711bp) protein (237aa)
Lysozyme n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H2I7_9RHIZ rbh
Lysozyme {ECO:0000313|EMBL:ESW65160.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
lysozyme
SCNpilot_cont_300_bf_scaffold_1106_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7817..8473)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F8K8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV12646.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
Uracil-DNA glycosylase superfamily protein
SCNpilot_cont_300_bf_scaffold_1106_9
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8485..9066)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y7D0_MESOW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY63442.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_cont_300_bf_scaffold_1106_10
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9342..9740
DNA (399bp) protein (133aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=1 Tax=Rhizobium loti RepID=UPI00037503C8
SCNpilot_cont_300_bf_scaffold_1106_11
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9852..12080
DNA (2229bp) protein (743aa)
GTP pyrophosphokinase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q985B2_RHILO rbh
GTP pyrophosphokinase
(P)ppGpp synthetase, RelA/SpoT family {ECO:0000313|EMBL:ETA72137.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
SCNpilot_cont_300_bf_scaffold_1106_12
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12180..12758
DNA (579bp) protein (193aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7GAQ9_9RHIZ rbh
SCNpilot_cont_300_bf_scaffold_1106_13
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12769..13149
DNA (381bp) protein (127aa)
virulence protein n=1 Tax=Rhizobium loti RepID=UPI000363BA78
Virulence protein {ECO:0000313|EMBL:AID29028.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 76
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_300_bf_scaffold_1106_14
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13398..13997
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLQ7_MESCW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV13933.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium cice
SCNpilot_cont_300_bf_scaffold_1106_15
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13994..14407
DNA (414bp) protein (138aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
UPI0003CEBE2F related cluster n=1 Tax=unknown RepID=UPI0003CEBE2F
holo-ACP synthase
SCNpilot_cont_300_bf_scaffold_1106_16
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14486..15235
DNA (750bp) protein (250aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
signal peptidase I (EC:3.4.21.89) rbh
UPI0003CFB7B0 related cluster n=1 Tax=unknown RepID=UPI0003CFB7B0 rbh
SCNpilot_cont_300_bf_scaffold_1106_17
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15235..15945
DNA (711bp) protein (237aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:00
UPI0003CF81D0 related cluster n=1 Tax=unknown RepID=UPI0003CF81D0 rbh
ribonuclease III
SCNpilot_cont_300_bf_scaffold_1106_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16124..17050
DNA (927bp) protein (309aa)
UPI0003CEF042 related cluster n=1 Tax=unknown RepID=UPI0003CEF042 rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sourc
GTP-binding protein Era
SCNpilot_cont_300_bf_scaffold_1106_19
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17519..18655
DNA (1137bp) protein (379aa)
porin n=1 Tax=Rhizobium loti RepID=UPI00037E5F88 rbh
Porin omp2b {ECO:0000313|EMBL:AID29037.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
porin
SCNpilot_cont_300_bf_scaffold_1106_20
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18788..19564
DNA (777bp) protein (259aa)
UPI0003CF1F67 related cluster n=1 Tax=unknown RepID=UPI0003CF1F67 rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1287298 species="Bacteria; Proteobacteria; Al
recO; DNA repair protein RecO
SCNpilot_cont_300_bf_scaffold_1106_21
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19561..20079
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KT54_MESAW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB47194.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium aust
SCNpilot_cont_300_bf_scaffold_1106_22
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20141..22897
DNA (2757bp) protein (919aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y7B5_MESOW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH89730.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium oppo
SCNpilot_cont_300_bf_scaffold_1106_23
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23031..23549
DNA (519bp) protein (173aa)
UPI0003CFC81D related cluster n=1 Tax=unknown RepID=UPI0003CFC81D rbh
RNA polymerase sigma70 {ECO:0000313|EMBL:ESZ24189.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
sigma-70 family RNA polymerase sigma factor
SCNpilot_cont_300_bf_scaffold_1106_24
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23546..24337
DNA (792bp) protein (264aa)
UPI0003D03F7C related cluster n=1 Tax=unknown RepID=UPI0003D03F7C rbh
Anti-sigma factor {ECO:0000313|EMBL:ESZ24190.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C08
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1106_25
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24533..25630
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F862_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV12670.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
GCN5-like N-acetyltransferase
SCNpilot_cont_300_bf_scaffold_1106_26
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25637..27100
DNA (1464bp) protein (488aa)
RimK domain-containing protein ATP-grasp n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9V1_9RHIZ rbh
RimK domain-containing protein ATP-grasp {ECO:0000313|EMBL:EHH11462.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
RimK domain-containing protein ATP-grasp rbh
SCNpilot_cont_300_bf_scaffold_1106_27
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27120..27392
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FH66_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX75572.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1106_28
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27409..28200)
DNA (792bp) protein (264aa)
UPI0003CE810A related cluster n=1 Tax=unknown RepID=UPI0003CE810A rbh
Transcriptional regulator {ECO:0000313|EMBL:CDX19026.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1106_29
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28408..29325
DNA (918bp) protein (306aa)
UPI0003CF2301 related cluster n=2 Tax=unknown RepID=UPI0003CF2301 rbh
Fatty acid desaturase {ECO:0000313|EMBL:CDX33328.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifa
fatty acid desaturase
SCNpilot_cont_300_bf_scaffold_1106_30
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29365..31533)
DNA (2169bp) protein (723aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F866_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV12675.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Displaying items 1-30 of 38 in total

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