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SCNpilot_cont_300_bf_scaffold_267

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_267_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148..522
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J195_POLGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ68740.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 /
SCNpilot_cont_300_bf_scaffold_267_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1527..1973
DNA (447bp) protein (149aa)
UPI0003D03FB2 related cluster n=1 Tax=unknown RepID=UPI0003D03FB2
MucR family transcriptional regulator {ECO:0000313|EMBL:ESZ11054.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
transcriptional regulatory protein
SCNpilot_cont_300_bf_scaffold_267_3
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2100..4154)
DNA (2055bp) protein (685aa)
UPI0003CFC37D related cluster n=1 Tax=unknown RepID=UPI0003CFC37D
Uncharacterized protein {ECO:0000313|EMBL:ESZ11001.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_267_4
unknown

Not on your lists

comp(4099..4497)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_267_5
unknown

Not on your lists

comp(4501..4947)
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_267_6
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4944..5738)
DNA (795bp) protein (265aa)
UPI0003D02C46 related cluster n=1 Tax=unknown RepID=UPI0003D02C46
Chromosome partitioning protein {ECO:0000313|EMBL:ESZ10998.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
chromosome partitioning ATPase
SCNpilot_cont_300_bf_scaffold_267_7
unknown

Not on your lists

comp(5738..5878)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_267_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5875..8556)
DNA (2682bp) protein (894aa)
Type IV secretory pathway, VirD4 component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0GXI6_RHILT rbh
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:EJB02320.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
TRAG family protein
SCNpilot_cont_300_bf_scaffold_267_9
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8531..9556)
DNA (1026bp) protein (342aa)
P-type DNA transfer ATPase VirB11 n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q748_9RHIZ
P-type DNA transfer ATPase VirB11
P-type DNA transfer ATPase VirB11 {ECO:0000313|EMBL:CDI11905.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
SCNpilot_cont_300_bf_scaffold_267_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9553..10917)
DNA (1365bp) protein (455aa)
conjugal transfer protein TrbI n=1 Tax=Rhizobium leguminosarum RepID=UPI00037597E9 rbh
conjugation TrbI family protein
Conjugation TrbI family protein {ECO:0000313|EMBL:ACI59589.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
SCNpilot_cont_300_bf_scaffold_267_11
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10929..11765)
DNA (837bp) protein (279aa)
Type IV secretion system TrbG/VirB9 family protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SU79_RHIET rbh
type IV secretion system TrbG/VirB9 family protein
Type IV secretion system TrbG/VirB9 family protein {ECO:0000313|EMBL:AGS25124.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
SCNpilot_cont_300_bf_scaffold_267_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11762..12472)
DNA (711bp) protein (237aa)
Type IV secretory pathway, component VirB8 n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HCX2_RHILT
Type IV secretory pathway, component VirB8 {ECO:0000313|EMBL:EJB08305.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A
VirB8 family protein
SCNpilot_cont_300_bf_scaffold_267_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12642..13658)
DNA (1017bp) protein (339aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A5A3_RHILW
TrbL/VirB6 plasmid conjugal transfer protein
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ACI59586.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium grou
SCNpilot_cont_300_bf_scaffold_267_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13672..13869)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HCY5_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJB08303.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
hypothetical protein
SCNpilot_cont_300_bf_scaffold_267_15
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13866..14636)
DNA (771bp) protein (257aa)
UPI0003D02C88 related cluster n=1 Tax=unknown RepID=UPI0003D02C88
Conjugal transfer protein {ECO:0000313|EMBL:ESZ11031.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
conjugal transfer protein
SCNpilot_cont_300_bf_scaffold_267_16
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14664..15830)
DNA (1167bp) protein (389aa)
Soluble lytic murein transglycosylase-like protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QE79_9RHIZ rbh
Soluble lytic murein transglycosylase-like protein
Soluble lytic murein transglycosylase-like protein {ECO:0000313|EMBL:CDI11898.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteriu
SCNpilot_cont_300_bf_scaffold_267_17
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15811..18312)
DNA (2502bp) protein (834aa)
UPI0003D00830 related cluster n=1 Tax=unknown RepID=UPI0003D00830
ATPase {ECO:0000313|EMBL:ESZ11033.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
trbE; TrbE
SCNpilot_cont_300_bf_scaffold_267_18
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18313..18639)
DNA (327bp) protein (109aa)
Type IV secretory pathway VirB3 family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A598_RHILW
Type VI secretion protein {ECO:0000313|EMBL:KJF65665.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" so
type IV secretory pathway VirB3 family protein
SCNpilot_cont_300_bf_scaffold_267_19
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18649..19029)
DNA (381bp) protein (127aa)
Type IV secretory pathway, VirB2 component (Pilin) n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HCY2_RHILT
Type IV secretory pathway, VirB2 component (Pilin) {ECO:0000313|EMBL:EJB08298.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteriu
Conjugal transfer protein TrbC
SCNpilot_cont_300_bf_scaffold_267_20
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19029..19913)
DNA (885bp) protein (295aa)
UPI0003CFBF03 related cluster n=1 Tax=unknown RepID=UPI0003CFBF03
Uncharacterized protein {ECO:0000313|EMBL:ESZ11036.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
lytic transglycosylase-like protein
SCNpilot_cont_300_bf_scaffold_267_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20369..20800)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QE74_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDN95510.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agroba
exported protein of unknown function
SCNpilot_cont_300_bf_scaffold_267_22
unknown

Not on your lists

comp(20809..21720)
DNA (912bp) protein (304aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_267_23
unknown

Not on your lists

22409..22882
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_267_24
unknown

Not on your lists

comp(23189..23527)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_267_25
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23858..24466
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae RepID=E7EJA8_RHILV
Nuclease SNase-like protein {ECO:0000313|EMBL:CDN95488.1}; Flags: Precursor;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
hypothetical protein
SCNpilot_cont_300_bf_scaffold_267_26
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24463..25116
DNA (654bp) protein (218aa)
Nuclease SNase-like protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S5E6_RHIET
nuclease SNase-like protein
Nuclease SNase-like protein {ECO:0000313|EMBL:AGS25135.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
SCNpilot_cont_300_bf_scaffold_267_27
unknown

Not on your lists

25113..25430
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_267_28
unknown

Not on your lists

25448..25777
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_267_29
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25800..26360
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035EE38D
Uncharacterized protein {ECO:0000313|EMBL:ADV31300.2}; TaxID=387 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="
hypothetical protein
SCNpilot_cont_300_bf_scaffold_267_30
Pantoea sp. PSNIH2, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26380..26703)
DNA (324bp) protein (108aa)
XRE family transcriptional regulator {ECO:0000313|EMBL:AIX73468.1}; TaxID=1484157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pant
Displaying items 1-30 of 80 in total

View Taxonomy