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SCNpilot_cont_300_bf_scaffold_606

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_606_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..625
DNA (624bp) protein (208aa)
AraC family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI000381670A rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACS56873.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
SCNpilot_cont_300_bf_scaffold_606_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(544..1002)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A9F20
Uncharacterized protein {ECO:0000313|EMBL:CDX18591.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
SCNpilot_cont_300_bf_scaffold_606_3
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1115..2194)
DNA (1080bp) protein (360aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037720F9 rbh
D-alanine--D-alanine ligase
SCNpilot_cont_300_bf_scaffold_606_4
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2306..2986
DNA (681bp) protein (227aa)
UPI0003CE05C6 related cluster n=1 Tax=unknown RepID=UPI0003CE05C6
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:ESY81297.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
SCNpilot_cont_300_bf_scaffold_606_5
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3080..3391)
DNA (312bp) protein (104aa)
UPI0003CE7CAB related cluster n=1 Tax=unknown RepID=UPI0003CE7CAB
MocE {ECO:0000313|EMBL:ESY90334.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
Rieske (2Fe-2S) domain-containing protein
SCNpilot_cont_300_bf_scaffold_606_6
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3500..4447)
DNA (948bp) protein (316aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YL41_9RHIZ rbh
Putative rhizopine-binding protein {ECO:0000313|EMBL:CDX20400.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh
sugar ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_606_7
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4563..5570)
DNA (1008bp) protein (336aa)
Desaturase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YL42_9RHIZ rbh
Desaturase {ECO:0000313|EMBL:CDX40346.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
fatty acid hydroxylase protein
SCNpilot_cont_300_bf_scaffold_606_8
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5578..6369)
DNA (792bp) protein (264aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YL43_9RHIZ rbh
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000313|EMBL:CDX40349.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;"
SCNpilot_cont_300_bf_scaffold_606_9
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6444..7562)
DNA (1119bp) protein (373aa)
LacI family transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YL44_9RHIZ rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:CDX40352.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
laci1; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor
SCNpilot_cont_300_bf_scaffold_606_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7623..8435
DNA (813bp) protein (271aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KTH0_MESAW rbh
Type 11 methyltransferase {ECO:0000313|EMBL:CDX19937.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
methylase involved in ubiquinone/menaquinone biosynthesis
SCNpilot_cont_300_bf_scaffold_606_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8572..9402)
DNA (831bp) protein (277aa)
2,5-diketo-D-gluconate reductase A {ECO:0000313|EMBL:CDX27742.1}; EC=1.1.1.274 {ECO:0000313|EMBL:CDX27742.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phylloba
2,5-didehydrogluconate reductase (EC:1.1.1.274) rbh
2,5-diketo-D-gluconate reductase A n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFS2_9RHIZ rbh
SCNpilot_cont_300_bf_scaffold_606_12
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9581..9925
DNA (345bp) protein (115aa)
Small multidrug resistance protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KCW9_METEX
Small multidrug resistance protein {ECO:0000313|EMBL:EHP94656.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Met
emrE; small multidrug efflux pump, DMT superfamily
SCNpilot_cont_300_bf_scaffold_606_13
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9928..10473
DNA (546bp) protein (182aa)
Regulatory protein TetR n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YFA2_9RHIZ
Regulatory protein TetR {ECO:0000313|EMBL:EHH09583.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amo
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_606_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10483..10968)
DNA (486bp) protein (162aa)
Probable phosphoglycerate mutase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98MW8_RHILO
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:ETA73019.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
phosphoglycerate mutase
SCNpilot_cont_300_bf_scaffold_606_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11304..12119)
DNA (816bp) protein (272aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phospho
Phosphonoacetaldehyde hydrolase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9M8_9RHIZ rbh
phosphonoacetaldehyde hydrolase
SCNpilot_cont_300_bf_scaffold_606_16
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12116..13318)
DNA (1203bp) protein (401aa)
Putative FAD dependent oxidoreductase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBE5_9RHIZ rbh
Putative FAD dependent oxidoreductase {ECO:0000313|EMBL:CCV13631.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
FAD dependent oxidoreductase
SCNpilot_cont_300_bf_scaffold_606_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13524..14708
DNA (1185bp) protein (395aa)
Aspartate aminotransferase, PLP-dependent {ECO:0000313|EMBL:CDX18602.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDX18602.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phy
aromatic-amino-acid transaminase (EC:2.6.1.57)
UPI0003D04DD9 related cluster n=1 Tax=unknown RepID=UPI0003D04DD9 rbh
SCNpilot_cont_300_bf_scaffold_606_18
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14802..15665
DNA (864bp) protein (288aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19)
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H1H9_9RHIZ rbh
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:ESZ06500.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_606_19
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15721..17112)
DNA (1392bp) protein (464aa)
GTPase HflX n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EQ50_9RHIZ rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobact
GTP-binding protein HflX
SCNpilot_cont_300_bf_scaffold_606_20
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17113..17358)
DNA (246bp) protein (82aa)
RNA-binding protein Hfq n=13 Tax=Mesorhizobium RepID=HFQ_RHILO
RNA chaperone Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhi
SCNpilot_cont_300_bf_scaffold_606_21
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17506..18369)
DNA (864bp) protein (288aa)
D-amino acid aminotransferase {ECO:0000313|EMBL:EHH11544.1}; EC=2.6.1.21 {ECO:0000313|EMBL:EHH11544.1};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacter
D-amino acid aminotransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9N5_9RHIZ rbh
class IV aminotransferase
SCNpilot_cont_300_bf_scaffold_606_22
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18464..19861)
DNA (1398bp) protein (466aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQZ0_MESAW rbh
Nitrogen assimilation regulatory protein {ECO:0000313|EMBL:CDX22438.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains rbh
SCNpilot_cont_300_bf_scaffold_606_23
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19815..22112)
DNA (2298bp) protein (766aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; M
UPI0003CFF1E8 related cluster n=1 Tax=unknown RepID=UPI0003CFF1E8 rbh
PAS sensor protein rbh
SCNpilot_cont_300_bf_scaffold_606_24
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22236..23693)
DNA (1458bp) protein (486aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YCR6_MESOW rbh
Fis family two component sigma-54 specific transcriptional regulator rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:ESY62760.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_cont_300_bf_scaffold_606_25
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23690..24820)
DNA (1131bp) protein (377aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; M
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9N9_9RHIZ rbh
nitrogen reguration protein nirB protein
SCNpilot_cont_300_bf_scaffold_606_26
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24817..25842)
DNA (1026bp) protein (342aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobact
tRNA-dihydrouridine synthase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBD5_9RHIZ rbh
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_606_27
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25983..27212
DNA (1230bp) protein (410aa)
UPI0003D056B8 related cluster n=1 Tax=unknown RepID=UPI0003D056B8 rbh
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; M
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SCNpilot_cont_300_bf_scaffold_606_28
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27209..27697
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBL5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV13618.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
CinA domain-containing protein
SCNpilot_cont_300_bf_scaffold_606_29
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27714..28169)
DNA (456bp) protein (152aa)
cyclase n=1 Tax=Rhizobium loti RepID=UPI00036E88CD
Cyclase/dehydrase {ECO:0000313|EMBL:CDX35730.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS33
cyclase/dehydrase
SCNpilot_cont_300_bf_scaffold_606_30
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28180..29145)
DNA (966bp) protein (322aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
UPI0003CDFA28 related cluster n=1 Tax=unknown RepID=UPI0003CDFA28 rbh
lipoate synthase rbh
Displaying items 1-30 of 34 in total

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