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SCNpilot_cont_300_bf_scaffold_875

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_875_1
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..464)
DNA (462bp) protein (154aa)
AraC family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00035CE5C0
AraC family transcriptional regulator protein
AraC family transcriptional regulator protein {ECO:0000313|EMBL:AIC27866.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
SCNpilot_cont_300_bf_scaffold_875_2
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

535..903
DNA (369bp) protein (123aa)
Putative peroxiredoxin n=1 Tax=Rhizobium sp. CF122 RepID=J2RDN7_9RHIZ
Putative peroxiredoxin {ECO:0000313|EMBL:EJL50837.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
peroxiredoxin
SCNpilot_cont_300_bf_scaffold_875_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(955..2097)
DNA (1143bp) protein (381aa)
(S)-mandelate dehydrogenase {ECO:0000313|EMBL:CDX15764.1}; EC=1.1.99.31 {ECO:0000313|EMBL:CDX15764.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriac
L-lactate dehydrogenase (cytochrome) (EC:1.1.2.3) rbh
UPI0003D01D23 related cluster n=1 Tax=unknown RepID=UPI0003D01D23 rbh
SCNpilot_cont_300_bf_scaffold_875_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2111..2950)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WF6_RHOFD
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
SCNpilot_cont_300_bf_scaffold_875_5
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3166..4074)
DNA (909bp) protein (303aa)
Arginase/agmatinase/formiminoglutamase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNG8_MESCW
arginase/agmatinase/formiminoglutamase
Arginase/agmatinase/formiminoglutamase {ECO:0000313|EMBL:ADV12850.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
SCNpilot_cont_300_bf_scaffold_875_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4292..4858
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A2FB7A
Uncharacterized protein {ECO:0000313|EMBL:CDX18587.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
SCNpilot_cont_300_bf_scaffold_875_7
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5231..6052)
DNA (822bp) protein (274aa)
UPI0003CFCDAA related cluster n=1 Tax=unknown RepID=UPI0003CFCDAA rbh
PhnP {ECO:0000313|EMBL:ESZ68323.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
hydrolase
SCNpilot_cont_300_bf_scaffold_875_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6049..6849)
DNA (801bp) protein (267aa)
LuxR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00037FE8CA rbh
Putative metallodependent hydrolase {ECO:0000313|EMBL:CDX16408.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesor
hydrolase, TatD family
SCNpilot_cont_300_bf_scaffold_875_9
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6849..8399)
DNA (1551bp) protein (517aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YCP9_MESOW rbh
SCNpilot_cont_300_bf_scaffold_875_10
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8485..9537)
DNA (1053bp) protein (351aa)
DNA polymerase III, delta prime subunit n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F8P7_9RHIZ rbh
DNA polymerase III subunit delta'
DNA polymerase III subunit delta {ECO:0000313|EMBL:ESY80751.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
SCNpilot_cont_300_bf_scaffold_875_11
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9534..10226)
DNA (693bp) protein (231aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=765698 species="Bacteria; Proteobacteria; Alph
Thymidylate kinase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ESB2_9RHIZ rbh
SCNpilot_cont_300_bf_scaffold_875_12
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10388..11551)
DNA (1164bp) protein (388aa)
Penicillin binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98MV3_RHILO rbh
penicillin binding protein
Penicillin binding protein {ECO:0000313|EMBL:BAB48010.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti
SCNpilot_cont_300_bf_scaffold_875_13
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11775..12977)
DNA (1203bp) protein (401aa)
UPI0003CFFC77 related cluster n=1 Tax=unknown RepID=UPI0003CFFC77 rbh
Rare lipoprotein A {ECO:0000313|EMBL:ESZ24838.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C0
rare lipoprotein A
SCNpilot_cont_300_bf_scaffold_875_14
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13317..13754
DNA (438bp) protein (146aa)
UPI0003CDD4F1 related cluster n=1 Tax=unknown RepID=UPI0003CDD4F1
Glyoxalase {ECO:0000313|EMBL:ESY69524.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;
Glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_300_bf_scaffold_875_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14279..14512
DNA (234bp) protein (78aa)
integrase n=1 Tax=Thiobacillus denitrificans RepID=UPI000362CAEC
phage integrase
Phage integrase {ECO:0000313|EMBL:ABE62812.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (str
SCNpilot_cont_300_bf_scaffold_875_16
unknown

Not on your lists

comp(14950..15144)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_875_17
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15650..16042
DNA (393bp) protein (131aa)
UPI0003CF3ED8 related cluster n=1 Tax=unknown RepID=UPI0003CF3ED8
Signal peptide protein {ECO:0000313|EMBL:ESX62421.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_875_18
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16206..16859
DNA (654bp) protein (218aa)
Membrane protein n=3 Tax=Mesorhizobium RepID=V7EVJ1_9RHIZ rbh
Membrane protein {ECO:0000313|EMBL:ESZ56210.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C1
integral membrane protein TerC
SCNpilot_cont_300_bf_scaffold_875_19
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17013..18326
DNA (1314bp) protein (438aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8T1_MESCW rbh
MiaB-like tRNA modifying protein YliG rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
SCNpilot_cont_300_bf_scaffold_875_20
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18406..19473)
DNA (1068bp) protein (356aa)
UPI0003CEE201 related cluster n=1 Tax=unknown RepID=UPI0003CEE201 rbh
hypothetical protein
Putative ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:ETA73044.1}; Flags: Precursor;; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
SCNpilot_cont_300_bf_scaffold_875_21
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19524..20444)
DNA (921bp) protein (307aa)
Permease protein of sugar ABC transporter n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBH2_9RHIZ rbh
Permease protein of sugar ABC transporter {ECO:0000313|EMBL:CCV13661.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
putative ABC-type transport system, permease component
SCNpilot_cont_300_bf_scaffold_875_22
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20444..21574)
DNA (1131bp) protein (377aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8T5_MESCW rbh
ABC-type uncharacterized transport system, permease component
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:AGB46477.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllo
Displaying 22 items

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