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SCNpilot_cont_300_bf_scaffold_115

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Displaying items 1-30 of 326 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_115_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

203..1597
DNA (1395bp) protein (465aa)
YibE/F family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D089_PSEUX rbh
hypothetical protein
YibE/F family protein {ECO:0000313|EMBL:AEA25745.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (stra
SCNpilot_cont_300_bf_scaffold_115_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1635..2192)
DNA (558bp) protein (186aa)
Methyltransferase type 12 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D090_PSEUX
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:AEA25746.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
SCNpilot_cont_300_bf_scaffold_115_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2443..3702)
DNA (1260bp) protein (420aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
histidyl-tRNA synthetase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEC07 rbh
SCNpilot_cont_300_bf_scaffold_115_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3699..4388)
DNA (690bp) protein (230aa)
Beta-lactamase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D092_PSEUX rbh
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AEA25748.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
SCNpilot_cont_300_bf_scaffold_115_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4472..5305
DNA (834bp) protein (278aa)
Peptidyl-prolyl cis-trans isomerase cyclophilin type n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D093_PSEUX rbh
cyclophilin type peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase cyclophilin type {ECO:0000313|EMBL:AEA25749.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse
SCNpilot_cont_300_bf_scaffold_115_6
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5665..6318
DNA (654bp) protein (218aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QRY7_9PSEU
acetylcholinesterase
SCNpilot_cont_300_bf_scaffold_115_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6509..8833)
DNA (2325bp) protein (775aa)
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:AEA25750.1}; EC=2.7.6.5 {ECO:0000313|EMBL:AEA25750.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D094_PSEUX rbh
SCNpilot_cont_300_bf_scaffold_115_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8859..9407)
DNA (549bp) protein (183aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
adenine phosphoribosyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEC0B
adenine phosphoribosyltransferase
SCNpilot_cont_300_bf_scaffold_115_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9404..10603)
DNA (1200bp) protein (400aa)
Protein-export membrane protein SecF n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D096_PSEUX rbh
protein-export membrane protein SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
SCNpilot_cont_300_bf_scaffold_115_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10605..12353)
DNA (1749bp) protein (583aa)
Protein translocase subunit SecD n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D097_PSEUX rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia diox
secD; Protein-export membrane protein secD
SCNpilot_cont_300_bf_scaffold_115_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12417..12830)
DNA (414bp) protein (138aa)
Preprotein translocase, YajC subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D098_PSEUX
preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:AEA25754.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia diox
SCNpilot_cont_300_bf_scaffold_115_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12883..13935)
DNA (1053bp) protein (351aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales;
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D099_PSEUX rbh
Holliday junction ATP-dependent DNA helicase ruvB
SCNpilot_cont_300_bf_scaffold_115_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14032..14628)
DNA (597bp) protein (199aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0A0_PSEUX
Holliday junction ATP-dependent DNA helicase ruvA
SCNpilot_cont_300_bf_scaffold_115_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14625..15197)
DNA (573bp) protein (191aa)
Crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0A1_PSEUX
SCNpilot_cont_300_bf_scaffold_115_15
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15280..15843)
DNA (564bp) protein (188aa)
Putative adenylate kinase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LCI4_9ACTO
adenylate kinase
Putative adenylate kinase {ECO:0000313|EMBL:CCH21531.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lu
SCNpilot_cont_300_bf_scaffold_115_16
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15890..16402
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JXE7_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH30766.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
SCNpilot_cont_300_bf_scaffold_115_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16403..17752)
DNA (1350bp) protein (450aa)
Diguanylate cyclase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMY7_PSEUX
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AEA25086.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
SCNpilot_cont_300_bf_scaffold_115_18
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18131..19354)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EZ03_MODMB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH88616.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain
SCNpilot_cont_300_bf_scaffold_115_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19696..22491)
DNA (2796bp) protein (932aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I {ECO:0000313|EMBL:AEA25760.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AEA25760.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sour
DNA polymerase I n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0A4_PSEUX rbh
SCNpilot_cont_300_bf_scaffold_115_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22665..23240
DNA (576bp) protein (192aa)
Stress protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0A5_PSEUX rbh
stress protein
Stress protein {ECO:0000313|EMBL:AEA25761.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
SCNpilot_cont_300_bf_scaffold_115_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23251..23934
DNA (684bp) protein (228aa)
Tellurium resistance n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0A6_PSEUX rbh
Tellurium resistance
Tellurium resistance {ECO:0000313|EMBL:AEA25762.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strai
SCNpilot_cont_300_bf_scaffold_115_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23939..25141
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0A7_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25763.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_115_23
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25138..26505
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00036B9570 rbh
Phosphoribosyltransferase {ECO:0000313|EMBL:KJK54445.1}; TaxID=1609137 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_115_24
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26502..27635
DNA (1134bp) protein (378aa)
phosphoribosyltransferase n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000374DC08 rbh
Phosphoribosyltransferase {ECO:0000313|EMBL:KJY45255.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
phosphoribosyltransferase rbh
SCNpilot_cont_300_bf_scaffold_115_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27644..28495
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0A8_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25764.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_115_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28530..28985
DNA (456bp) protein (152aa)
Tellurite resistance TerB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0A9_PSEUX
Tellurite resistance TerB
Tellurite resistance TerB {ECO:0000313|EMBL:AEA25765.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
SCNpilot_cont_300_bf_scaffold_115_27
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29171..29746)
DNA (576bp) protein (192aa)
Stress protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PFW6_9ACTO
stress protein
Stress protein {ECO:0000313|EMBL:ACY98731.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC
SCNpilot_cont_300_bf_scaffold_115_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29743..30855)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0B0_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25766.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_115_29
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31012..32961)
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YSD7_NOCFA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD58904.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
SCNpilot_cont_300_bf_scaffold_115_30
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32954..34636)
DNA (1683bp) protein (561aa)
Putative heat shock protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YSD6_NOCFA rbh
heat shock protein rbh
Putative heat shock protein {ECO:0000313|EMBL:BAD58905.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
Displaying items 1-30 of 326 in total

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