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SCNpilot_cont_300_bf_scaffold_212

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_212_1
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(204..1799)
DNA (1596bp) protein (532aa)
Alpha amylase catalytic region n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5ULL6_CELFN
alpha amylase
Alpha amylase catalytic region {ECO:0000313|EMBL:ADG74058.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain A
SCNpilot_cont_300_bf_scaffold_212_2
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1954..3405)
DNA (1452bp) protein (484aa)
katA; catalase (EC:1.11.1.6)
Catalase n=1 Tax=Frankia sp. QA3 RepID=I9KCE3_9ACTO rbh
Catalase {ECO:0000313|EMBL:EIV91625.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
SCNpilot_cont_300_bf_scaffold_212_3
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3640..4383
DNA (744bp) protein (248aa)
major facilitator superfamily mfs_1 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDBEF
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADL44711.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora auran
SCNpilot_cont_300_bf_scaffold_212_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4400..5407
DNA (1008bp) protein (336aa)
endonuclease/exonuclease/phosphatase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDBF0 rbh
hypothetical protein
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AEA24893.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia diox
SCNpilot_cont_300_bf_scaffold_212_5
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5418..6011)
DNA (594bp) protein (198aa)
NmrA family protein n=1 Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3A033_STRMB
NmrA family protein {ECO:0000313|EMBL:EME98388.1}; TaxID=1223523 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = D
hydroxylase
SCNpilot_cont_300_bf_scaffold_212_6
unknown

Not on your lists

comp(6020..6202)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_212_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6310..6834)
DNA (525bp) protein (175aa)
Carbonic anhydrase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS78_PSEUX
carbonic anhydrase
Carbonic anhydrase {ECO:0000313|EMBL:AEA22638.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
SCNpilot_cont_300_bf_scaffold_212_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6850..7932)
DNA (1083bp) protein (361aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
Aspartate-semialdehyde dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS76_PSEUX rbh
SCNpilot_cont_300_bf_scaffold_212_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7929..9194)
DNA (1266bp) protein (422aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
Aspartokinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS75_PSEUX rbh
aspartate kinase
SCNpilot_cont_300_bf_scaffold_212_10
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9685..12030
DNA (2346bp) protein (782aa)
isoquinoline 1-oxidoreductase subunit beta n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0003620054 rbh
Isoquinoline 1-oxidoreductase, beta subunit {ECO:0000313|EMBL:EWM17762.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein rbh
SCNpilot_cont_300_bf_scaffold_212_11
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12039..12506
DNA (468bp) protein (156aa)
4-hydroxybenzoyl-CoA reductase, gamma subunit n=1 Tax=Streptomyces sp. AA4 RepID=D9VDS3_9ACTO
4-hydroxybenzoyl-CoA reductase, gamma subunit {ECO:0000313|EMBL:EFL10137.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces s
isoquinoline 1-oxidoreductase subunit alpha
SCNpilot_cont_300_bf_scaffold_212_12
unknown

Not on your lists

12724..13017
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_212_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13024..13326)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS73_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22633.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_212_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13584..15380
DNA (1797bp) protein (599aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS72_PSEUX rbh
SCNpilot_cont_300_bf_scaffold_212_15
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15454..18150
DNA (2697bp) protein (899aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JU90_SACES rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH31400.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
SCNpilot_cont_300_bf_scaffold_212_16
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18134..19468)
DNA (1335bp) protein (445aa)
Putative Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EX20_MODMB
Uncharacterized protein {ECO:0000313|EMBL:KGM00773.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
peptidase S8 and S53 subtilisin kexin sedolisin
SCNpilot_cont_300_bf_scaffold_212_17
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19534..20001)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035D41F6
Uncharacterized protein {ECO:0000313|EMBL:EWM14096.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_212_18
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20003..20563)
DNA (561bp) protein (187aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUS2_ACIC1
Sigma-70 region 2 domain protein {ECO:0000313|EMBL:CCH77817.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.
ECF subfamily RNA polymerase sigma-24 factor
SCNpilot_cont_300_bf_scaffold_212_19
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20738..21721)
DNA (984bp) protein (328aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MR15_SACVD
oligopeptide/dipeptide ABC transporter, ATP-binding protein
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ACU98601.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" s
SCNpilot_cont_300_bf_scaffold_212_20
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21718..22692)
DNA (975bp) protein (325aa)
ATPase component of ABC-type dipeptide/oligopeptide/nickel transport system n=3 Tax=Amycolatopsis mediterranei RepID=D8HKG3_AMYMU rbh
dipeptide/oligopeptide/nickel ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEK47596.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Am
SCNpilot_cont_300_bf_scaffold_212_21
unknown

Not on your lists

23062..23226
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_212_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23237..23854)
DNA (618bp) protein (206aa)
Recombination protein RecR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS67_PSEUX rbh
Recombination protein recR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" so
SCNpilot_cont_300_bf_scaffold_212_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23858..24181)
DNA (324bp) protein (108aa)
Nucleoid-associated protein Psed_0353 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS66_PSEUX
hypothetical protein
Nucleoid-associated protein Psed_0353 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
SCNpilot_cont_300_bf_scaffold_212_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24265..25128
DNA (864bp) protein (288aa)
Cell wall hydrolase/autolysin n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS65_PSEUX rbh
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:AEA22625.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudon
SCNpilot_cont_300_bf_scaffold_212_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25115..25759)
DNA (645bp) protein (215aa)
SNARE associated Golgi protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ12_PSEUX rbh
hypothetical protein
SNARE associated Golgi protein-like protein {ECO:0000313|EMBL:AEA27208.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
SCNpilot_cont_300_bf_scaffold_212_26
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25820..28096)
DNA (2277bp) protein (759aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:EME17640.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EME17640.1};; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rh
DNA polymerase III subunits gamma and tau n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2W1Z0_9NOCA rbh
DNA polymerase III gamma subunit
SCNpilot_cont_300_bf_scaffold_212_27
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28436..29653)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI000361273B rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:EXG79174.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44
Integrase
SCNpilot_cont_300_bf_scaffold_212_28
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29650..29859)
DNA (210bp) protein (70aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LQ04_9ACTO
excisionase family DNA binding domain-containing protein
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:AGL21467.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="A
SCNpilot_cont_300_bf_scaffold_212_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29856..31586)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27662.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_212_30
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31583..33169)
DNA (1587bp) protein (529aa)
cell division protein FtsK n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262761F
ftsK; DNA segregation ATPase FtsK/SpoIIIE
DNA segregation ATPase FtsK/SpoIIIE {ECO:0000313|EMBL:AIJ26857.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methan
Displaying items 1-30 of 112 in total

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