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SCNpilot_cont_300_bf_scaffold_314

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_314_1
unknown

Not on your lists

comp(92..301)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_314_2
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(869..1648)
DNA (780bp) protein (260aa)
Allantoin/glyoxylate utilization operons negative regulator n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4RFC2_9ACTO rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:KFF98707.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
allR; allantoin/glyoxylate utilization operons negative regulator rbh
SCNpilot_cont_300_bf_scaffold_314_3
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1718..3196
DNA (1479bp) protein (493aa)
aldehyde dehydrogenase (acceptor) (EC:1.2.1.8)
Aldehyde dehydrogenase (Acceptor) {ECO:0000313|EMBL:ACU98143.1}; EC=1.2.1.8 {ECO:0000313|EMBL:ACU98143.1};; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Sacch
betaine-aldehyde dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEAA4 rbh
SCNpilot_cont_300_bf_scaffold_314_4
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3193..4710
DNA (1518bp) protein (506aa)
amino acid permease n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268B3 rbh
amino acid transporter rbh
Amino acid transporter {ECO:0000313|EMBL:AIJ24590.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCNpilot_cont_300_bf_scaffold_314_5
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4707..6416
DNA (1710bp) protein (570aa)
choline dehydrogenase (EC:1.1.99.1)
Probable choline dehydrogenase {ECO:0000313|EMBL:ABG93618.1}; EC=1.1.99.1 {ECO:0000313|EMBL:ABG93618.1};; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;
choline oxidase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEAA6 rbh
SCNpilot_cont_300_bf_scaffold_314_6
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6403..7401)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K5H8_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH32857.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
SCNpilot_cont_300_bf_scaffold_314_7
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7374..8423)
DNA (1050bp) protein (350aa)
Serine/threonine protein kinase n=3 Tax=Amycolatopsis mediterranei RepID=D8HKB8_AMYMU rbh
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AEK47551.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterrane
SCNpilot_cont_300_bf_scaffold_314_8
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8433..8672)
DNA (240bp) protein (80aa)
hypothetical protein, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF280
Uncharacterized protein {ECO:0000313|EMBL:ERI40742.1}; Flags: Fragment;; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
lipoprotein
SCNpilot_cont_300_bf_scaffold_314_9
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8669..8791)
DNA (123bp) protein (41aa)
Putative lipoprotein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EUE8_MODMB
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CCH87011.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC5
SCNpilot_cont_300_bf_scaffold_314_10
unknown

Not on your lists

comp(9144..9335)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_314_11
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9376..11208
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI0003621F3A rbh
Mycobacterium llatzerense strain CLUC14 Mllat_contig000030, whole genome shotgun sequence {ECO:0000313|EMBL:KIU15265.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteria
putative signal-transduction protein containing cAMP-binding and CBS domains
SCNpilot_cont_300_bf_scaffold_314_12
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11233..11730)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000361C207
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EWC63719.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospor
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_314_13
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11834..12490
DNA (657bp) protein (219aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound o
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000375B891
putative acyl carrier protein phosphodiesterase
SCNpilot_cont_300_bf_scaffold_314_14
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12513..13109)
DNA (597bp) protein (199aa)
membrane protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036C28F0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEL19349.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
SCNpilot_cont_300_bf_scaffold_314_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13241..13990)
DNA (750bp) protein (250aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYK0_PSEUX rbh
ABC transporter substrate-binding protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEA26570.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
SCNpilot_cont_300_bf_scaffold_314_16
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14040..14720
DNA (681bp) protein (227aa)
Acetyltransferase n=4 Tax=Amycolatopsis mediterranei RepID=I7DVK7_AMYMS
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AEK41577.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699
SCNpilot_cont_300_bf_scaffold_314_17
unknown

Not on your lists

comp(14695..14949)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_314_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15009..16232
DNA (1224bp) protein (408aa)
MFS transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEB6C rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA26569.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
SCNpilot_cont_300_bf_scaffold_314_19
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16223..17521)
DNA (1299bp) protein (433aa)
NADH dehydrogenase n=1 Tax=Rhodococcus opacus RepID=UPI00029CAF41 rbh
NADH dehydrogenase {ECO:0000313|EMBL:AII05493.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
putative NADH dehydrogenase rbh
SCNpilot_cont_300_bf_scaffold_314_20
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17531..18160)
DNA (630bp) protein (210aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V004_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL10991.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_314_21
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18253..19104
DNA (852bp) protein (284aa)
lipase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037E558F rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFL10992.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
lipase class 2
SCNpilot_cont_300_bf_scaffold_314_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19184..20083
DNA (900bp) protein (300aa)
Peptidase S15 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXN4_PSEUX rbh
peptidase S15
Peptidase S15 {ECO:0000313|EMBL:AEA27617.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
SCNpilot_cont_300_bf_scaffold_314_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20134..23331)
DNA (3198bp) protein (1066aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:AEA26566.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AEA26566.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYJ6_PSEUX rbh
SCNpilot_cont_300_bf_scaffold_314_24
unknown

Not on your lists

comp(23429..23737)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_314_25
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24113..24832
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI000370CE11 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP81690.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_300_bf_scaffold_314_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24826..25083)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000369BC76
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA26563.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
SCNpilot_cont_300_bf_scaffold_314_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25301..25807)
DNA (507bp) protein (169aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYJ1_PSEUX
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA26561.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
SCNpilot_cont_300_bf_scaffold_314_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25804..27474)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXI6_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26560.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_314_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27724..28653)
DNA (930bp) protein (310aa)
glucokinase (EC:2.7.1.2)
Glucokinase {ECO:0000313|EMBL:AEA26559.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AEA26559.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="P
Glucokinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXI5_PSEUX rbh
SCNpilot_cont_300_bf_scaffold_314_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28752..29861
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEB75 rbh
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AEA26558.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
Displaying items 1-30 of 100 in total

View Taxonomy