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SCNpilot_cont_300_bf_scaffold_328

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_328_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..171)
DNA (171bp) protein (57aa)
diaminobutyrate/2-oxoglutarate aminotransferase (EC:2.6.1.76)
Diaminobutyrate/2-oxoglutarate aminotransferase {ECO:0000313|EMBL:AEA27950.1}; EC=2.6.1.76 {ECO:0000313|EMBL:AEA27950.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonoca
diadenosine tetraphosphatase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE0EE
SCNpilot_cont_300_bf_scaffold_328_2
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(250..1614)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS615 RepID=UPI00036A841A rbh
Uncharacterized protein {ECO:0000313|EMBL:ELS50905.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue5
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_328_3
Gordonia sputi, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1617..1823)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI0003614648
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1089453 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sputi
tatA1; sec-independent protein translocase protein TatA
SCNpilot_cont_300_bf_scaffold_328_4
Tsukamurella paurometabola, Tsukamurella, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2351..3358
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Gordonia kroppenstedtii RepID=UPI000367B019
cytochrome C oxidase caa3-type, assembly factor CtaG-like protein
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:ADG79089.1}; TaxID=521096 species="Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae; Tsukamurella.;"
SCNpilot_cont_300_bf_scaffold_328_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3364..5073)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPM9_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25146.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_328_6
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5315..6790
DNA (1476bp) protein (492aa)
Sodium/hydrogen exchanger n=3 Tax=Amycolatopsis mediterranei RepID=D8I7P6_AMYMU rbh
cvrA; sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:AEK44315.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (str
SCNpilot_cont_300_bf_scaffold_328_7
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7052..7411)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00036D5A3D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV96983.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-2
SCNpilot_cont_300_bf_scaffold_328_8
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7408..8448)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BRL9_MYCCN
short-chain dehydrogenase of unknown substrate specificity
Uncharacterized protein {ECO:0000313|EMBL:AFM19926.1}; Flags: Precursor;; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium ch
SCNpilot_cont_300_bf_scaffold_328_9
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8708..10075
DNA (1368bp) protein (456aa)
amino acid transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDBCD rbh
MFS transporter {ECO:0000313|EMBL:KJR08262.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
MFS superfamily proline/betaine transporter
SCNpilot_cont_300_bf_scaffold_328_10
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10306..12018
DNA (1713bp) protein (571aa)
amino acid permease n=1 Tax=Streptomyces sp. AA1529 RepID=UPI00031285C8 rbh
Amino acid permease {ECO:0000313|EMBL:EFL07343.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
amino acid permease
SCNpilot_cont_300_bf_scaffold_328_11
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12108..12380)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6V3_PELHB
Cobyric acid synthase {ECO:0000313|EMBL:GAK44580.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_328_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12424..14214)
DNA (1791bp) protein (597aa)
Cl-channel voltage-gated family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR45_PSEUX rbh
Cl-channel voltage-gated family protein
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:AEA24482.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
SCNpilot_cont_300_bf_scaffold_328_13
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14322..14810
DNA (489bp) protein (163aa)
EstGX1 n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LLY4_9ACTO
EstGX1
EstGX1 {ECO:0000313|EMBL:AGL16270.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_300_bf_scaffold_328_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14856..17225
DNA (2370bp) protein (790aa)
heavy metal translocating P-type ATPase (EC:3.6.3.4)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AEA26518.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AEA26518.1};; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales;
carbonate dehydratase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD01 rbh
SCNpilot_cont_300_bf_scaffold_328_15
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17222..19201
DNA (1980bp) protein (660aa)
copper resistance protein D n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD02 rbh
Copper resistance transporter {ECO:0000313|EMBL:EFL09773.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
copper resistance protein CopD
SCNpilot_cont_300_bf_scaffold_328_16
unknown

Not on your lists

19285..19617
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_328_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19584..20354
DNA (771bp) protein (257aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X650_NAKMY rbh
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACV76821.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Naka
SCNpilot_cont_300_bf_scaffold_328_18
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20361..21734
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;"
Putative histidine kinase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K0G0_SACES rbh
putative histidine kinase
SCNpilot_cont_300_bf_scaffold_328_19
Streptomyces sp. F8, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22407..23558
DNA (1152bp) protein (384aa)
membrane protein n=1 Tax=Streptomyces prunicolor RepID=UPI00036B4445 rbh
Permease {ECO:0000313|EMBL:AHE39994.1}; TaxID=1436085 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. F8.;"
membrane protein
SCNpilot_cont_300_bf_scaffold_328_20
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23699..24427)
DNA (729bp) protein (243aa)
cation transporter n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7834A
Cation efflux family protein {ECO:0000313|EMBL:EWM19202.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
cation efflux protein
SCNpilot_cont_300_bf_scaffold_328_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24899..25534)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUE1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25331.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_328_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25531..26013)
DNA (483bp) protein (161aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXD1_PSEUX
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AEA26505.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
SCNpilot_cont_300_bf_scaffold_328_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26010..26321)
DNA (312bp) protein (104aa)
Transcriptional regulator, ArsR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXD0_PSEUX
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEA26504.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
SCNpilot_cont_300_bf_scaffold_328_24
unknown

Not on your lists

comp(26393..26914)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_328_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26911..27750)
DNA (840bp) protein (280aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=479431
Prolipoprotein diacylglyceryl transferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7H0_NAKMY
prolipoprotein diacylglyceryl transferase
SCNpilot_cont_300_bf_scaffold_328_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27815..29188
DNA (1374bp) protein (458aa)
chloride channel protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B42F79
Cl-channel voltage-gated family protein
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:AEA24261.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
SCNpilot_cont_300_bf_scaffold_328_27
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29450..30847
DNA (1398bp) protein (466aa)
phosphoesterase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7812D
Uncharacterized protein {ECO:0000313|EMBL:KHL01392.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
phosphoesterase
SCNpilot_cont_300_bf_scaffold_328_28
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30844..31401
DNA (558bp) protein (186aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS62200.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
SCNpilot_cont_300_bf_scaffold_328_29
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31411..32535)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037B8411
Membrane protein {ECO:0000313|EMBL:EWM18199.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_328_30
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32589..33965)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DCB3_9NOCA
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
beta-lactamase domain-containing protein
Displaying items 1-30 of 99 in total

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