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SCNpilot_cont_300_bf_scaffold_383

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_383_1
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..246)
DNA (246bp) protein (82aa)
Putative transporter n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YYV2_NOCFA
transporter
Acetate permease {ECO:0000313|EMBL:KFD42786.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
SCNpilot_cont_300_bf_scaffold_383_2
unknown

Not on your lists

comp(298..405)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_383_3
Rhodococcus fascians, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

454..1521
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000369F55B rbh
Putative MhpC-like hydrolase or acyltransferase {ECO:0000313|EMBL:AET25197.1}; TaxID=1051973 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus fasc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_383_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1606..2802)
DNA (1197bp) protein (399aa)
aspartate transaminase (EC:2.6.1.1)
Aspartate transaminase {ECO:0000313|EMBL:AEA22692.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AEA22692.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;
Aspartate transaminase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKF2_PSEUX rbh
SCNpilot_cont_300_bf_scaffold_383_5
Puccinia triticina, Puccinia, Pucciniales, Pucciniomycetes, Basidiomycota, Fungi

Not on your lists

comp(2889..3593)
DNA (705bp) protein (235aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RPE6_NEMVE
Uncharacterized protein {ECO:0000313|EnsemblFungi:PTTG_00001P0}; TaxID=630390 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia.
putative secreted protein
SCNpilot_cont_300_bf_scaffold_383_6
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3854..4771)
DNA (918bp) protein (306aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Saccharomonospora azurea SZMC 14600 RepID=H0KAX5_9PSEU
SCNpilot_cont_300_bf_scaffold_383_7
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5244..6263
DNA (1020bp) protein (340aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V2W6_9PSEU rbh
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EID54469.1}; Flags: Precursor;; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;
glycerophosphoryl diester phosphodiesterase rbh
SCNpilot_cont_300_bf_scaffold_383_8
unknown

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6260..6532
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_383_9
unknown

Not on your lists

comp(6914..7111)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_383_10
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7267..8241
DNA (975bp) protein (325aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2) rbh
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y869_THEBD rbh
SCNpilot_cont_300_bf_scaffold_383_11
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8238..8510)
DNA (273bp) protein (91aa)
Zinc finger, UBP-type n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QQI3_MYCS2
Zn-finger-containing protein
Zinc finger, UBP-type {ECO:0000313|EMBL:ABK75714.1}; TaxID=246196 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC
SCNpilot_cont_300_bf_scaffold_383_12
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8537..10105
DNA (1569bp) protein (523aa)
Na+/H+ antiporter n=2 Tax=Saccharopolyspora erythraea RepID=A4FL68_SACEN rbh
Na+/H+ antiporter
Sodium/hydrogen exchanger {ECO:0000313|EMBL:EQD83742.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythrae
SCNpilot_cont_300_bf_scaffold_383_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10179..11099)
DNA (921bp) protein (307aa)
soluble epoxide hydrolase (EC:3.3.2.10)
Soluble epoxide hydrolase {ECO:0000313|EMBL:AEA22688.1}; EC=3.3.2.10 {ECO:0000313|EMBL:AEA22688.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocard
Soluble epoxide hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKE8_PSEUX rbh
SCNpilot_cont_300_bf_scaffold_383_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11101..11601)
DNA (501bp) protein (167aa)
Integral membrane protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKE7_PSEUX
hypothetical protein
Integral membrane protein {ECO:0000313|EMBL:AEA22687.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
SCNpilot_cont_300_bf_scaffold_383_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11671..12906)
DNA (1236bp) protein (412aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKE6_PSEUX rbh
Na(+)/H(+) antiporter NhaA
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudo
SCNpilot_cont_300_bf_scaffold_383_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12992..13420)
DNA (429bp) protein (143aa)
Class I peptide chain release factor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKE5_PSEUX
class I peptide chain release factor
Class I peptide chain release factor {ECO:0000313|EMBL:AEA22685.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia diox
SCNpilot_cont_300_bf_scaffold_383_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13449..15422)
DNA (1974bp) protein (658aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIT4_PSEUX rbh
SCNpilot_cont_300_bf_scaffold_383_18
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15564..16208)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037648A7
GPR1/FUN34/yaaH family protein
GPR1/FUN34/yaaH family protein {ECO:0000313|EMBL:AEW98783.1}; Uncharacterized protein {ECO:0000313|EMBL:CCB72166.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetacea
SCNpilot_cont_300_bf_scaffold_383_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16516..17289
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIT3_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22678.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_383_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17636..18457)
DNA (822bp) protein (274aa)
HAD-superfamily subfamily IB hydrolase, TIGR01490 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIT2_PSEUX rbh
HAD-superfamily hydrolase
HAD-superfamily subfamily IB hydrolase, TIGR01490 {ECO:0000313|EMBL:AEA22677.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudo
SCNpilot_cont_300_bf_scaffold_383_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18847..19971
DNA (1125bp) protein (375aa)
Helicase/secretion neighborhood CpaE-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIT1_PSEUX rbh
helicase/secretion CpaE-like protein
Helicase/secretion neighborhood CpaE-like protein {ECO:0000313|EMBL:AEA22676.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudo
SCNpilot_cont_300_bf_scaffold_383_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19968..21140
DNA (1173bp) protein (391aa)
Helicase/secretion neighborhood ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIT0_PSEUX rbh
helicase/secretion ATPase
Helicase/secretion neighborhood ATPase {ECO:0000313|EMBL:AEA22675.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
SCNpilot_cont_300_bf_scaffold_383_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21134..21937
DNA (804bp) protein (268aa)
Type II secretion system F domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIS9_PSEUX
type II secretion system F domain-containing protein
Type II secretion system F domain protein {ECO:0000313|EMBL:AEA22674.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
SCNpilot_cont_300_bf_scaffold_383_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21934..22659
DNA (726bp) protein (242aa)
Type II secretion system F domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIS8_PSEUX
type II secretion system F domain-containing protein
Type II secretion system F domain protein {ECO:0000313|EMBL:AEA22673.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
SCNpilot_cont_300_bf_scaffold_383_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22692..22880
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIS7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22672.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_383_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22880..23293
DNA (414bp) protein (138aa)
Helicase/secretion neighborhood TadE-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIS6_PSEUX
helicase/secretion neighborhood TadE-like protein
Helicase/secretion neighborhood TadE-like protein {ECO:0000313|EMBL:AEA22671.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardi
SCNpilot_cont_300_bf_scaffold_383_27
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23151..23951)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HIB2_STRA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIA04986.1}; TaxID=68570 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus.;"
SCNpilot_cont_300_bf_scaffold_383_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24145..26559)
DNA (2415bp) protein (805aa)
Helicase/secretion neighborhood putative DEAH-box helicase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIS5_PSEUX rbh
Helicase/secretion neighborhood putative DEAH-box helicase {ECO:0000313|EMBL:AEA22670.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sourc
helicase/secretion DEAH-box helicase
SCNpilot_cont_300_bf_scaffold_383_29
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26590..27021)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI00036FE39A
Uncharacterized protein {ECO:0000313|EMBL:GAB89792.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
alanine rich lipoprotein LppW
SCNpilot_cont_300_bf_scaffold_383_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27018..27530)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003645CC6
alanine rich lipoprotein LppW
Putative alanine rich lipoprotein LppW {ECO:0000313|EMBL:AEA26146.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source
Displaying items 1-30 of 68 in total

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