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SCNpilot_cont_300_bf_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_391_1
unknown

Not on your lists

718..1029
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_391_2
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1218..5933
DNA (4716bp) protein (1572aa)
hypothetical protein, partial n=1 Tax=Salinispora arenicola RepID=UPI00036F440F rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU02815.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
SCNpilot_cont_300_bf_scaffold_391_3
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6432..7619)
DNA (1188bp) protein (396aa)
Site-specific recombinase XerC n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X3S5_9PSEU rbh
Site-specific recombinase XerC {ECO:0000313|EMBL:EHR52143.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora mari
Integrase family protein
SCNpilot_cont_300_bf_scaffold_391_4
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7619..7816)
DNA (198bp) protein (66aa)
excisionase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626A76
Predicted protein {ECO:0000313|EMBL:EFL04433.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
excisionase
SCNpilot_cont_300_bf_scaffold_391_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7829..9502)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT7_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27662.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_391_6
unknown

Not on your lists

comp(9499..9795)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_391_7
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9792..11372)
DNA (1581bp) protein (527aa)
DNA segregation ATPase FtsK/SpoIIIE n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YWP0_9PSEU rbh
DNA segregation ATPase FtsK/SpoIIIE {ECO:0000313|EMBL:EME52754.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decapl
cell division protein FtsK rbh
SCNpilot_cont_300_bf_scaffold_391_8
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11372..11635)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI0003820694
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL48862.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
SCNpilot_cont_300_bf_scaffold_391_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11692..11982)
DNA (291bp) protein (97aa)
Transcriptional regulator WhiB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT4_PSEUX
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
SCNpilot_cont_300_bf_scaffold_391_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11979..12356)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27658.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_391_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12465..12884)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT2_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27657.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_391_12
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13057..13827
DNA (771bp) protein (257aa)
Putative regulatory protein KorSA, GntR-family transcriptional regulator n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QBZ9_9PSEU rbh
Putative regulatory protein KorSA, GntR-family transcriptional regulator {ECO:0000313|EMBL:EMD23622.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolat
GntR family transcriptional regulator rbh
SCNpilot_cont_300_bf_scaffold_391_13
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13839..14498
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00037E6447 rbh
Uncharacterized protein {ECO:0000313|EMBL:EMD23621.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;
hypothetical protein
SCNpilot_cont_300_bf_scaffold_391_14
unknown

Not on your lists

comp(14540..15430)
DNA (891bp) protein (297aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_391_15
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15427..16098)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9809 RepID=I4HPY8_MICAE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAG02185.1}; TaxID=449447 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa (stra
SCNpilot_cont_300_bf_scaffold_391_16
unknown

Not on your lists

16643..17335
DNA (693bp) protein (231aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_391_17
unknown

Not on your lists

comp(17213..17491)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_391_18
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19055..19324
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036E24C8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK34526.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (st
SCNpilot_cont_300_bf_scaffold_391_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19527..19889
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM98_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23011.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
SCNpilot_cont_300_bf_scaffold_391_20
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19971..20252
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8KZI7_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW15967.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_cont_300_bf_scaffold_391_21
unknown

Not on your lists

20737..21243
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_391_22
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21396..22568)
DNA (1173bp) protein (391aa)
serine protease n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036710B4 rbh
serine protease
Serine protease {ECO:0000313|EMBL:AIJ24322.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCNpilot_cont_300_bf_scaffold_391_23
unknown

Not on your lists

comp(22671..22922)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_391_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22987..23760)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJT9_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26964.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_391_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23850..24485
DNA (636bp) protein (212aa)
SNARE associated Golgi protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL88_PSEUX rbh
hypothetical protein
SNARE associated Golgi protein-like protein {ECO:0000313|EMBL:AEA25017.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
SCNpilot_cont_300_bf_scaffold_391_26
unknown

Not on your lists

24642..24836
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_391_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24833..25546
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU04_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23412.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_391_28
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25549..27396)
DNA (1848bp) protein (616aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BFK3_STRRD rbh
sodium/proton antiporter
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Stre
SCNpilot_cont_300_bf_scaffold_391_29
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

27495..28739
DNA (1245bp) protein (415aa)
Peptidase M23 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIL1_9CHLR rbh
Peptidase M23 {ECO:0000313|EMBL:CCF84523.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolan
Peptidase M23
SCNpilot_cont_300_bf_scaffold_391_30
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28763..29422)
DNA (660bp) protein (220aa)
ribulose-5-phosphate 4-epimerase-like epimerase or aldolase (EC:4.1.2.17)
L-fuculose-phosphate aldolase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WSJ0_9MICO
L-fuculose-phosphate aldolase {ECO:0000313|EMBL:GAB95077.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;
Displaying items 1-30 of 116 in total

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