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SCNpilot_cont_300_bf_scaffold_635

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_635_1
unknown

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_635_2
unknown

Not on your lists

comp(77..427)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_635_3
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(446..1468)
DNA (1023bp) protein (341aa)
ornithine aminotransferase n=1 Tax=Glaciibacter superstes RepID=UPI0003B661C6
Uncharacterized protein {ECO:0000313|EMBL:EWM12133.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
osmY; osmotically inducible periplasmic protein OsmY
SCNpilot_cont_300_bf_scaffold_635_4
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1856..2140)
DNA (285bp) protein (95aa)
Putative transposase n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WIZ2_9ACTO
Putative transposase {ECO:0000313|EMBL:GAB93751.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
transposase
SCNpilot_cont_300_bf_scaffold_635_5
unknown

Not on your lists

comp(2225..2446)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_635_6
unknown

Not on your lists

2800..2964
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_635_7
unknown

Not on your lists

3120..3224
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_635_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3369..4172)
DNA (804bp) protein (268aa)
Methyltransferase type 11 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMT7_PSEUX rbh
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEA25036.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
SCNpilot_cont_300_bf_scaffold_635_9
unknown

Not on your lists

4754..4999
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_635_10
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4996..5199
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:BAK34871.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (st
SCNpilot_cont_300_bf_scaffold_635_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5564..5755
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYN3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26603.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_635_12
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6609..7625
DNA (1017bp) protein (339aa)
Cation efflux system protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CBJ5_STRBB rbh
cation efflux system protein
Cation efflux system protein {ECO:0000313|EMBL:ADI12872.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (s
SCNpilot_cont_300_bf_scaffold_635_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7670..8557)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWI8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28680.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
SCNpilot_cont_300_bf_scaffold_635_14
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8681..10792)
DNA (2112bp) protein (704aa)
Alpha-galactosidase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZB9_9ACTO rbh
Alpha-galactosidase {ECO:0000313|EMBL:EWM18142.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
glycoside hydrolase clan GH-D
SCNpilot_cont_300_bf_scaffold_635_15
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10919..12274
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000376F343 rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWT02350.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intraspora
family 1 extracellular solute-binding protein
SCNpilot_cont_300_bf_scaffold_635_16
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12288..13244
DNA (957bp) protein (319aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZC1_9ACTO rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCH16918.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospo
ABC transporter inner membrane protein rbh
SCNpilot_cont_300_bf_scaffold_635_17
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13241..14125
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000381743D rbh
ABC transporter permease {ECO:0000313|EMBL:EWT02348.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-244
ABC transporter inner membrane protein rbh
SCNpilot_cont_300_bf_scaffold_635_18
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14122..16098
DNA (1977bp) protein (659aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1150864 species="Bacteria; Actinobacteria; Micr
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZC3_9ACTO rbh
SCNpilot_cont_300_bf_scaffold_635_19
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16098..16865
DNA (768bp) protein (256aa)
Transcriptional regulator, DeoR family n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ESJ5_MODMB rbh
DeoR family transcriptional regulator rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CCH86358.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter m
SCNpilot_cont_300_bf_scaffold_635_20
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16975..18045
DNA (1071bp) protein (357aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae
Galactose-1-phosphate uridylyltransferase n=1 Tax=Rhodococcus equi (strain 103S) RepID=E4W946_RHOE1 rbh
galT; UTP-glucose-1-phosphate uridylyltransferase rbh
SCNpilot_cont_300_bf_scaffold_635_21
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18086..19198
DNA (1113bp) protein (371aa)
Galactokinase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H364_CELFA
galactokinase
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113
SCNpilot_cont_300_bf_scaffold_635_22
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19473..20492
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7EWJ0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ELP63239.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_635_23
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20492..21088
DNA (597bp) protein (199aa)
FMN-binding negative transcriptional regulator n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K4Q6_SACES
Transcriptional regulator {ECO:0000313|EMBL:EWM13884.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
FMN-binding negative transcriptional regulator
SCNpilot_cont_300_bf_scaffold_635_24
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21100..21627
DNA (528bp) protein (176aa)
Glyoxalase n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6L3W1_9ACTO
Glyoxalase {ECO:0000313|EMBL:EST38938.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_300_bf_scaffold_635_25
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21820..22368
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037A385F
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ADD44927.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain D
SCNpilot_cont_300_bf_scaffold_635_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22432..22914
DNA (483bp) protein (161aa)
Polyketide cyclase/dehydrase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT38_PSEUX
polyketide cyclase/dehydrase
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:AEA26256.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
SCNpilot_cont_300_bf_scaffold_635_27
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22915..24321)
DNA (1407bp) protein (469aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;"
Sensor histidine kinase n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PVD6_9PSEU rbh
histidine kinase rbh
SCNpilot_cont_300_bf_scaffold_635_28
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24330..25988)
DNA (1659bp) protein (553aa)
chemotaxis protein CheY n=1 Tax=Amycolatopsis methanolica RepID=UPI000374A553 rbh
trxB; thioredoxin reductase
Thioredoxin reductase {ECO:0000313|EMBL:AIJ24434.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCNpilot_cont_300_bf_scaffold_635_29
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26417..27103
DNA (687bp) protein (229aa)
binding-protein-dependent transporter inner membrane component n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE030
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABV97515.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;
SCNpilot_cont_300_bf_scaffold_635_30
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27096..28205
DNA (1110bp) protein (370aa)
glycine/betaine ABC transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE031 rbh
glycine betaine/carnitin ABC transporter ATP-binding protein
Glycine betaine/carnitin ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJE81428.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="S
Displaying items 1-30 of 63 in total

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