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SCNpilot_cont_300_bf_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 871 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_88_1
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(402..1130)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1S6_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47496.1}; Flags: Precursor;; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomona
SCNpilot_cont_300_bf_scaffold_88_2
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1676..2020
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WB47_KINRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS04036.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BA
SCNpilot_cont_300_bf_scaffold_88_3
unknown

Not on your lists

2938..3120
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_88_4
Corynebacterium doosanense, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3200..4507)
DNA (1308bp) protein (436aa)
resolvase domain-containing protein n=1 Tax=Brevibacterium linens RepID=UPI000050F989 rbh
resolvase rbh
Resolvase {ECO:0000313|EMBL:AIT60957.1}; TaxID=558173 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium doosanense CAU 212 = DSM 4543
SCNpilot_cont_300_bf_scaffold_88_5
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4509..5225)
DNA (717bp) protein (239aa)
ABC transporter related protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6P6_CELGA
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AEI11106.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC
SCNpilot_cont_300_bf_scaffold_88_6
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5225..6448)
DNA (1224bp) protein (408aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
UPI0003D59B21 related cluster n=1 Tax=unknown RepID=UPI0003D59B21 rbh
Histidyl-tRNA synthetase {ECO:0000313|EMBL:KGM10611.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
SCNpilot_cont_300_bf_scaffold_88_7
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6534..7649)
DNA (1116bp) protein (372aa)
Putative Na+ efflux ABC transporter, permease component n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK27_CELFN
Sodium ABC transporter permease {ECO:0000313|EMBL:EYR62772.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
putative Na+ efflux ABC transporter, permease component
SCNpilot_cont_300_bf_scaffold_88_8
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7646..8569)
DNA (924bp) protein (308aa)
ABC transporter related n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZU3_BEUC1 rbh
ABC transporter rbh
ABC transporter related {ECO:0000313|EMBL:ACQ81273.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8
SCNpilot_cont_300_bf_scaffold_88_9
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8677..9651)
DNA (975bp) protein (325aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK23_CELFN
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
SCNpilot_cont_300_bf_scaffold_88_10
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9626..10606)
DNA (981bp) protein (327aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZ69_CELFA rbh
dimethyladenosine transferase
SCNpilot_cont_300_bf_scaffold_88_11
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10789..10965
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:KDF01620.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19
SCNpilot_cont_300_bf_scaffold_88_12
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10962..11630
DNA (669bp) protein (223aa)
Menaquinol-cytochrome c reductase cytochrome b subunit n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WIY5_9ACTO rbh
Menaquinol-cytochrome c reductase cytochrome b subunit {ECO:0000313|EMBL:GAB92132.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhi
cytochrome b/b6 domain-containing protein
SCNpilot_cont_300_bf_scaffold_88_13
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11627..12601
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WEF7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB92131.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_88_14
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12652..13836)
DNA (1185bp) protein (395aa)
Transglycosylase domain protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK21_CELFN
transglycosylase
Transglycosylase domain protein {ECO:0000313|EMBL:ADG73763.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain
SCNpilot_cont_300_bf_scaffold_88_15
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14116..15306)
DNA (1191bp) protein (397aa)
G5 domain protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK20_CELFN rbh
G5 domain-containing protein rbh
G5 domain protein {ECO:0000313|EMBL:ADG73762.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM
SCNpilot_cont_300_bf_scaffold_88_16
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15469..16476)
DNA (1008bp) protein (336aa)
TatD-related deoxyribonuclease n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK19_CELFN
TatD-related deoxyribonuclease
TatD-related deoxyribonuclease {ECO:0000313|EMBL:ADG73761.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain A
SCNpilot_cont_300_bf_scaffold_88_17
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(16502..18295)
DNA (1794bp) protein (598aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
methionyl-tRNA synthetase (EC:6.1.1.10)
methionyl-tRNA synthetase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00031D6368 rbh
SCNpilot_cont_300_bf_scaffold_88_18
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18340..18954)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI0003074076
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47378.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC
SCNpilot_cont_300_bf_scaffold_88_19
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19101..20309)
DNA (1209bp) protein (403aa)
Glucose sorbosone dehydrogenase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK13_CELFN rbh
glucose sorbosone dehydrogenase
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:ADG73755.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain
SCNpilot_cont_300_bf_scaffold_88_20
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20365..20943
DNA (579bp) protein (193aa)
Isochorismatase hydrolase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6N6_CELGA
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:AEI11096.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127
SCNpilot_cont_300_bf_scaffold_88_21
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21009..21869)
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZ80_CELFA
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
SCNpilot_cont_300_bf_scaffold_88_22
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21925..23841
DNA (1917bp) protein (639aa)
Glycosyl transferase family 39 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK11_CELFN rbh
glycosyl transferase family protein
Glycosyl transferase family 39 {ECO:0000313|EMBL:ADG73753.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain A
SCNpilot_cont_300_bf_scaffold_88_23
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23846..25345)
DNA (1500bp) protein (500aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:ADG73752.1}; EC=3.2.1.52 {ECO:0000313|EMBL:ADG73752.1};; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;"
Beta-N-acetylhexosaminidase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK10_CELFN
SCNpilot_cont_300_bf_scaffold_88_24
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25342..26367)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002F27D2C rbh
Bile acid:sodium symporter
Bile acid:sodium symporter {ECO:0000313|EMBL:AEI11091.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127
SCNpilot_cont_300_bf_scaffold_88_25
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26491..26772
DNA (282bp) protein (94aa)
transglycosylase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002FA49F6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ39851.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
SCNpilot_cont_300_bf_scaffold_88_26
unknown

Not on your lists

26925..27179
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_88_27
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27193..27798)
DNA (606bp) protein (202aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="C
endo-1,4-beta-xylanase (EC:3.2.1.8)
endo-1,4-beta-xylanase n=1 Tax=Nesterenkonia sp. F RepID=UPI000255CB3F
SCNpilot_cont_300_bf_scaffold_88_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27795..29444)
DNA (1650bp) protein (550aa)
Beta-xylosidase (EC:3.2.1.37)
Beta-xylosidase {ECO:0000313|EMBL:CBL10126.1}; EC=3.2.1.37 {ECO:0000313|EMBL:CBL10126.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="
beta-xylosidase n=1 Tax=Lactobacillus suebicus RepID=UPI0002490593 rbh
SCNpilot_cont_300_bf_scaffold_88_29
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29538..30425)
DNA (888bp) protein (296aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E597_9MICO
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EIC08036.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacteri
binding-protein-dependent transporters inner membrane component
SCNpilot_cont_300_bf_scaffold_88_30
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30422..31462)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002FD6E87 rbh
putative sugar ABC transporter permease
Putative sugar ABC transporter, permease component {ECO:0000313|EMBL:CAN00319.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter m
Displaying items 1-30 of 871 in total

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