ggKbase home page

SCNpilot_cont_300_bf_scaffold_649

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_649_1
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131..1162)
DNA (1032bp) protein (344aa)
Transcriptional regulator, LacI family n=1 Tax=Frankia sp. EUN1f RepID=D3D4D8_9ACTO
LacI family transcription regulator {ECO:0000313|EMBL:KGM03872.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM
LacI family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_649_2
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1884..2750)
DNA (867bp) protein (289aa)
Cof hydrolase n=1 Tax=Arthrobacter sp. SJCon RepID=L8TT79_9MICC
Haloacid dehalogenase {ECO:0000313|EMBL:KGM10824.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
HAD-superfamily hydrolase
SCNpilot_cont_300_bf_scaffold_649_3
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2800..4551)
DNA (1752bp) protein (584aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F7ZZZ8_CELGA
phosphoenolpyruvate-protein phosphotransferase
SCNpilot_cont_300_bf_scaffold_649_4
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4548..4829)
DNA (282bp) protein (94aa)
fruB; phosphotransferase system, phosphocarrier protein HPr (EC:2.7.1.69)
Phosphotransferase system, phosphocarrier protein HPr n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B8P1_9MICO
Dihydroxyacetone kinase {ECO:0000313|EMBL:EYR64696.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
SCNpilot_cont_300_bf_scaffold_649_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5487..6932
DNA (1446bp) protein (482aa)
PTS system, beta-glucoside-specific IIBCA components n=3 Tax=Lactobacillus casei group RepID=K6Q7A5_LACCA rbh
PTS system beta-glucoside-specific transporter subunit IIBCA {ECO:0000313|EMBL:EPC87860.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" so
PTS beta-glucoside transporter subunit IIABC
SCNpilot_cont_300_bf_scaffold_649_6
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6994..8883
DNA (1890bp) protein (630aa)
2,4-dienoyl-CoA reductase (NADPH) (EC:1.3.1.34)
2,4-dienoyl-CoA reductase (NADPH) {ECO:0000313|EMBL:CCP27274.1}; EC=1.3.1.34 {ECO:0000313|EMBL:CCP27274.1};; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanae
2,4-dienoyl-CoA reductase (NADPH) n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LSI9_TEPAE rbh
SCNpilot_cont_300_bf_scaffold_649_7
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8921..9472
DNA (552bp) protein (184aa)
PTS system, beta-glucoside-specific, IIABC component {ECO:0000313|EMBL:EJF43954.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EJF43954.1};; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actino
PTS system, beta-glucoside-specific, IIABC component n=1 Tax=Actinomyces massiliensis F0489 RepID=J0NAG9_9ACTO
PTS system beta-glucoside-specific transporter subunit IIABC
SCNpilot_cont_300_bf_scaffold_649_8
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9475..10887
DNA (1413bp) protein (471aa)
Glycoside hydrolase family 1 n=2 Tax=Geobacillus RepID=C9RWU5_GEOSY rbh
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KFG72860.1}; TaxID=67332 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
glycoside hydrolase family 1
SCNpilot_cont_300_bf_scaffold_649_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10935..11819
DNA (885bp) protein (295aa)
Transcriptional antiterminator, BglG n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAD4_NAKMY
transcriptional antiterminator BglG
Transcriptional antiterminator, BglG {ECO:0000313|EMBL:ACV77299.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (st
SCNpilot_cont_300_bf_scaffold_649_10
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(11868..12527)
DNA (660bp) protein (220aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" sourc
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00037737BB
transaldolase
SCNpilot_cont_300_bf_scaffold_649_11
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12530..14008)
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346DB0F rbh
Xylulose kinase {ECO:0000313|EMBL:EYT60497.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
xylulokinase
SCNpilot_cont_300_bf_scaffold_649_12
Actinotignum schaalii, Actinotignum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14008..14661)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Actinobaculum schaalii FB123-CNA-2 RepID=S2VIK0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD27288.1}; TaxID=883067 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinotignum.;" source="Actinotignum schaalii FB123-CNA-2.;"
putative sugar phosphate isomerase involved in capsule formation
SCNpilot_cont_300_bf_scaffold_649_13
Actinotignum schaalii, Actinotignum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14693..16264)
DNA (1572bp) protein (524aa)
rbsA; ABC transporter ATP-binding protein (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Actinobaculum schaalii FB123-CNA-2 RepID=S2W3X6_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD27287.1}; TaxID=883067 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinotignum.;" source="Actinotignum schaalii FB123-CNA-2.;"
SCNpilot_cont_300_bf_scaffold_649_14
Actinotignum schaalii, Actinotignum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16266..17276)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Actinobaculum schaalii FB123-CNA-2 RepID=S2VKG1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD27286.1}; TaxID=883067 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinotignum.;" source="Actinotignum schaalii FB123-CNA-2.;"
rbsB; ribose ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_649_15
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17368..18423)
DNA (1056bp) protein (352aa)
ribose/xylose/arabinose/galactoside ABC transporter permease (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0Z064_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EJZ85409.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;
SCNpilot_cont_300_bf_scaffold_649_16
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18561..19538
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034733BA rbh
Transcriptional regulator {ECO:0000313|EMBL:EYT60499.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
DeoR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_649_17
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19535..20179
DNA (645bp) protein (215aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349A601
Uncharacterized protein {ECO:0000313|EMBL:EYT60906.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
SCNpilot_cont_300_bf_scaffold_649_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20220..20699)
DNA (480bp) protein (160aa)
Putative lactoylglutathione lyase n=1 Tax=Clostridium sp. D5 RepID=F0YT77_9CLOT
Putative lactoylglutathione lyase {ECO:0000313|EMBL:EGB94097.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_649_19
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20729..21766)
DNA (1038bp) protein (346aa)
Oxidoreductase n=1 Tax=Streptomyces sp. Mg1 RepID=B4VB49_9ACTO
Oxidoreductase {ECO:0000313|EMBL:EDX25186.1}; TaxID=465541 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
Oxidoreductase domain protein
SCNpilot_cont_300_bf_scaffold_649_20
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21772..22866)
DNA (1095bp) protein (365aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TZF7_9ACTO
ABC transporter permease {ECO:0000313|EMBL:KGM16935.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_649_21
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22863..23945)
DNA (1083bp) protein (361aa)
Monosaccharide ABC transporter membrane protein, CUT2 family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLY5_NOCSJ rbh
inner-membrane translocator
Monosaccharide ABC transporter membrane protein, CUT2 family {ECO:0000313|EMBL:ABL82820.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Noc
SCNpilot_cont_300_bf_scaffold_649_22
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23942..25459)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KNG4_9MICO
Lipase {ECO:0000313|EMBL:KGM16937.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;
ABC transporter-like protein
SCNpilot_cont_300_bf_scaffold_649_23
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25459..26490)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCI9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM80738.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
ABC sugar transporter, periplasmic ligand binding protein
SCNpilot_cont_300_bf_scaffold_649_24
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26643..27749
DNA (1107bp) protein (369aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JVZ4_ARTS2
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CDO24342.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="M
periplasmic binding protein/LacI transcriptional regulator
SCNpilot_cont_300_bf_scaffold_649_25
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27749..28549
DNA (801bp) protein (267aa)
Putative IclR family transcriptional regulatory protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M816_RHIL3
IclR family transcriptional regulatory protein
Putative IclR family transcriptional regulatory protein {ECO:0000313|EMBL:CAK10356.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobac
SCNpilot_cont_300_bf_scaffold_649_26
unknown

Not on your lists

comp(28932..30323)
DNA (1392bp) protein (464aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_649_27
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30320..30745)
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR65309.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
SCNpilot_cont_300_bf_scaffold_649_28
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31638..34649
DNA (3012bp) protein (1004aa)
Conjugative relaxase domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZU2_CELFA
Conjugal transfer protein {ECO:0000313|EMBL:EYR65215.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
conjugative relaxase domain-containing protein
SCNpilot_cont_300_bf_scaffold_649_29
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34661..35032
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003649A37
Uncharacterized protein {ECO:0000313|EMBL:EYR65216.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_649_30
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36052..37254
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W3M0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGM00730.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
Displaying items 1-30 of 37 in total

View Taxonomy