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SCNpilot_cont_300_bf_scaffold_1546

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1546_1
unknown

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2..178
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1546_2
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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426..1700
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A717
Uncharacterized protein {ECO:0000313|EMBL:EGY02187.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirill
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1546_3
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1759..2202)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H688_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE44400.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC
SCNpilot_cont_300_bf_scaffold_1546_4
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2206..2688)
DNA (483bp) protein (161aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A7P4_CELGA
Rieske (2Fe-2S) iron-sulfur domain protein
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:AEI13577.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (s
SCNpilot_cont_300_bf_scaffold_1546_5
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2740..4554)
DNA (1815bp) protein (605aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H690_CELFA rbh
Major facilitator transporter {ECO:0000313|EMBL:KGM03684.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.
EmrB/QacA subfamily drug resistance transporter
SCNpilot_cont_300_bf_scaffold_1546_6
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4776..5144
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI000380A832
hypothetical protein
DGPFAETKE family protein {ECO:0000313|EMBL:EWC64277.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospong
SCNpilot_cont_300_bf_scaffold_1546_7
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5170..6411
DNA (1242bp) protein (414aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PXX1_KRIFD rbh
putative ECF subfamily RNA polymerase sigma-24 subunit
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB33577.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribb
SCNpilot_cont_300_bf_scaffold_1546_8
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6486..9161)
DNA (2676bp) protein (892aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B700F2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ79968.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8
SCNpilot_cont_300_bf_scaffold_1546_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9158..10273)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036D9895
Uncharacterized protein {ECO:0000313|EMBL:KJL34577.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1546_10
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10299..11120)
DNA (822bp) protein (274aa)
binding-protein-dependent transport system inner membrane protein id=7720075 bin=CNBR_ACT species=Beutenbergia cavernae genus=Beutenbergia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACQ79966.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" sou
SCNpilot_cont_300_bf_scaffold_1546_11
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11120..12094)
DNA (975bp) protein (325aa)
binding-protein-dependent transport system inner membrane protein id=7720076 bin=CNBR_ACT species=Beutenbergia cavernae genus=Beutenbergia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACQ79965.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" sou
SCNpilot_cont_300_bf_scaffold_1546_12
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12209..13108)
DNA (900bp) protein (300aa)
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein id=7720077 bin=CNBR_ACT species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACT organism_group=Actinobacteria
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACX66020.1}; TaxID=481743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Geobacillus sp.
SCNpilot_cont_300_bf_scaffold_1546_13
unknown

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14268..14525
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1546_14
unknown

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14529..14870
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1546_15
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(14857..15432)
DNA (576bp) protein (192aa)
Ribokinase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C448_BEUC1
ribokinase
Ribokinase {ECO:0000313|EMBL:ACQ79961.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333
Displaying 15 items

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