ggKbase home page

SCNpilot_cont_300_bf_scaffold_1962

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1962_1
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
F420-dependent oxidoreductase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6E4_CELFA
F420-dependent oxidoreductase
F420-dependent oxidoreductase {ECO:0000313|EMBL:AEE45577.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 48
SCNpilot_cont_300_bf_scaffold_1962_2
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(318..1331)
DNA (1014bp) protein (338aa)
luciferase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00037BDBA0 rbh
Luciferase {ECO:0000313|EMBL:KGM03641.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
F420-dependent oxidoreductase
SCNpilot_cont_300_bf_scaffold_1962_3
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1403..2422)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002DBE4E2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI12659.1}; Flags: Precursor;; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (s
SCNpilot_cont_300_bf_scaffold_1962_4
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2507..3064
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002DB5D2C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI12660.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 /
SCNpilot_cont_300_bf_scaffold_1962_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3196..4293
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N1X0_KITSK
Uncharacterized protein {ECO:0000313|EMBL:ETK34033.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1962_6
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4342..6999
DNA (2658bp) protein (886aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" sour
Valine--tRNA ligase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6E2_CELFA rbh
tRNA synthetase valyl/leucyl anticodon-binding protein
SCNpilot_cont_300_bf_scaffold_1962_7
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7114..8928
DNA (1815bp) protein (605aa)
AMP-dependent synthetase and ligase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCI2_CELFN rbh
AMP-dependent synthetase and ligase rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADG74296.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (str
SCNpilot_cont_300_bf_scaffold_1962_8
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9005..9751)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0003075AA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI12667.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 /
SCNpilot_cont_300_bf_scaffold_1962_9
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10200..10538)
DNA (339bp) protein (113aa)
Chorismate mutase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCI0_CELFN
chorismate mutase
Chorismate mutase {ECO:0000313|EMBL:ADG74294.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM
SCNpilot_cont_300_bf_scaffold_1962_10
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10535..10696)
DNA (162bp) protein (54aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A0A5_CELGA
ATP-dependent Clp protease, ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae;
SCNpilot_cont_300_bf_scaffold_1962_11
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10672..11736)
DNA (1065bp) protein (355aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCH9_CELFN
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae;
ATP-dependent Clp protease ATP-binding subunit ClpX
SCNpilot_cont_300_bf_scaffold_1962_12
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11963..12664)
DNA (702bp) protein (234aa)
endopeptidase Clp (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H5W6_CELFA rbh
SCNpilot_cont_300_bf_scaffold_1962_13
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12693..13310)
DNA (618bp) protein (206aa)
endopeptidase Clp (EC:3.4.21.92) rbh
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H5W5_CELFA rbh
SCNpilot_cont_300_bf_scaffold_1962_14
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13576..14979)
DNA (1404bp) protein (468aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H5W4_CELFA rbh
trigger factor rbh
SCNpilot_cont_300_bf_scaffold_1962_15
unknown

Not on your lists

15154..15858
DNA (705bp) protein (235aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1962_16
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16065..16457)
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
twitching motility protein PilT n=1 Tax=Glaciibacter superstes RepID=UPI0003B5B405
PilT protein domain-containing protein
SCNpilot_cont_300_bf_scaffold_1962_17
Brachybacterium muris, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16459..16722)
DNA (264bp) protein (88aa)
prevent-host-death protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B5BE34
Antitoxin {ECO:0000313|EMBL:EYT48941.1}; TaxID=1249481 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium muris UCD-AY4.;"
prevent-host-death family protein
SCNpilot_cont_300_bf_scaffold_1962_18
unknown

Not on your lists

17503..18018
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1962_19
unknown

Not on your lists

18663..18896
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1962_20
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18893..19774)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI000365730C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ24008.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCNpilot_cont_300_bf_scaffold_1962_21
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20164..20328)
DNA (165bp) protein (55aa)
Putative DNA-binding protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RHG3_CLAMS
Uncharacterized protein {ECO:0000313|EMBL:KJC63295.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
DNA-binding protein
SCNpilot_cont_300_bf_scaffold_1962_22
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20337..21194)
DNA (858bp) protein (286aa)
Putative DNA-binding protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RHG3_CLAMS rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC63295.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
DNA-binding protein
SCNpilot_cont_300_bf_scaffold_1962_23
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21206..21838)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RWR0_RHOSR
Uncharacterized protein {ECO:0000313|EMBL:KJC63142.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1962_24
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22272..23165)
DNA (894bp) protein (298aa)
Dehydrogenase/decarboxylase protein n=1 Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HQB8_MYCMM rbh
dehydrogenase/decarboxylase protein rbh
Dehydrogenase/decarboxylase protein {ECO:0000313|EMBL:ACC42410.1}; TaxID=216594 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (
SCNpilot_cont_300_bf_scaffold_1962_25
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(23176..23670)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00037A5E62
regulatory protein TetR
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_cont_300_bf_scaffold_1962_26
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23849..24778
DNA (930bp) protein (310aa)
amidohydrolase (EC:3.5.1.47)
Amidohydrolase n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UZK1_9MICC
Amidohydrolase {ECO:0000313|EMBL:EMY35806.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
Displaying 26 items

View Taxonomy