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SCNpilot_cont_300_bf_scaffold_878

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_878_1
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..222
DNA (222bp) protein (74aa)
Transcriptional regulator, TetR family n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JS18_ARTS2
TetR family transcriptional regulator
SPG23_c4, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28916.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
SCNpilot_cont_300_bf_scaffold_878_2
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(400..1527)
DNA (1128bp) protein (376aa)
HNH endonuclease n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVY2_BEUC1
Uncharacterized protein {ECO:0000313|EMBL:KGM15571.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM
HNH endonuclease
SCNpilot_cont_300_bf_scaffold_878_3
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1528..1866)
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM16218.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM
SCNpilot_cont_300_bf_scaffold_878_4
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1980..2348)
DNA (369bp) protein (123aa)
glyoxalase n=1 Tax=Brevibacterium linens RepID=UPI00005102B5
Glyoxalase {ECO:0000313|EMBL:KJK43764.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocol
hypothetical protein
SCNpilot_cont_300_bf_scaffold_878_5
Corynebacterium glyciniphilum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2416..2913
DNA (498bp) protein (166aa)
MarR family protein n=1 Tax=Actinomyces massiliensis F0489 RepID=J1GZF2_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHW63029.1}; TaxID=1404245 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glyciniphilum
SCNpilot_cont_300_bf_scaffold_878_6
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2929..3693)
DNA (765bp) protein (255aa)
Esterase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A109_CELGA
esterase
Esterase {ECO:0000313|EMBL:AEI12767.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;
SCNpilot_cont_300_bf_scaffold_878_7
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4102..4629)
DNA (528bp) protein (176aa)
Regulatory protein MarR n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6V8_CELFA
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEE44467.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DS
SCNpilot_cont_300_bf_scaffold_878_8
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4754..6646
DNA (1893bp) protein (631aa)
ABC transporter related protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGC3_CELFN rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADG73106.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain
SCNpilot_cont_300_bf_scaffold_878_9
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6657..7241)
DNA (585bp) protein (195aa)
NUDIX hydrolase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6V6_CELFA
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEE44465.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113
SCNpilot_cont_300_bf_scaffold_878_10
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7320..7700
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Arthrobacter sp. M2012083 RepID=UPI0002DC0334
Uncharacterized protein {ECO:0000313|EMBL:KJL35163.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_878_11
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8287..9396)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6V5_CELFA rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE44464.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC
SCNpilot_cont_300_bf_scaffold_878_12
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9413..9988)
DNA (576bp) protein (192aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=593907 species="B
Deoxycytidine triphosphate deaminase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NB78_MICTS
deoxycytidine triphosphate deaminase rbh
SCNpilot_cont_300_bf_scaffold_878_13
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10256..12724
DNA (2469bp) protein (823aa)
Glycosyltransferase 36 n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A760_CELGA rbh
Glycosyltransferase 36 {ECO:0000313|EMBL:AEI13547.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / N
glycosyltransferase 36
SCNpilot_cont_300_bf_scaffold_878_14
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12831..13202)
DNA (372bp) protein (124aa)
GCN5-related N-acetyltransferase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6V0_CELFA
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEE44459.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC
SCNpilot_cont_300_bf_scaffold_878_15

Not on your lists

comp(13424..14023)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA044-N04 RepID=UPI000373D5D1
Uncharacterized protein {ECO:0000313|EMBL:KGA21322.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
Mn transporter
SCNpilot_cont_300_bf_scaffold_878_16
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

Not on your lists

14146..14406
DNA (261bp) protein (87aa)
Tax=RBG_13_WOR_2_44_8_curated
SCNpilot_cont_300_bf_scaffold_878_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14699..15598)
DNA (900bp) protein (300aa)
MgtE intracellular region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLX4_PSEUX
MgtE integral membrane protein
MgtE intracellular region {ECO:0000313|EMBL:AEA22322.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
SCNpilot_cont_300_bf_scaffold_878_18
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16816..17316
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H4R2_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE44263.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC
SCNpilot_cont_300_bf_scaffold_878_19
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17367..18866)
DNA (1500bp) protein (500aa)
Putative substrate-CoA ligase n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9ZEH2_STRSW rbh
substrate-CoA ligase
Putative substrate-CoA ligase {ECO:0000313|EMBL:CBG67431.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 8
SCNpilot_cont_300_bf_scaffold_878_20
Streptococcus urinalis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18943..19242)
DNA (300bp) protein (100aa)
MFS transporter n=1 Tax=Streptococcus henryi RepID=UPI000381F159
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHJ55960.1}; TaxID=764291 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococ
hypothetical protein
SCNpilot_cont_300_bf_scaffold_878_21
Listeria innocua, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19720..20124)
DNA (405bp) protein (135aa)
Major facilitator family transporter n=1 Tax=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) RepID=A0AKS5_LISW6
Inner membrane protein yhjX
Lin2274 protein {ECO:0000313|EMBL:CAC97502.1}; TaxID=272626 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria innocua serovar 6a (strain CLIP 11262).;"
SCNpilot_cont_300_bf_scaffold_878_22
Listeria welshimeri, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20193..21770)
DNA (1578bp) protein (526aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=386043 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" so
Acetate CoA-transferase YdiF n=1 Tax=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) RepID=A0AKS6_LISW6 rbh
pct; propionate CoA-transferase rbh
SCNpilot_cont_300_bf_scaffold_878_23
Actinomyces sp. oral taxon 848, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22019..23161
DNA (1143bp) protein (381aa)
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WLL6_9ACTO rbh
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EEZ79317.1}; TaxID=649743 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_878_24
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23195..23980
DNA (786bp) protein (262aa)
Electron transfer flavoprotein (FixA protein) n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GI47_PROFC
fixA; electron transfer flavoprotein FixA
Electron transfer flavoprotein (FixA protein) {ECO:0000313|EMBL:CEG96757.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propi
SCNpilot_cont_300_bf_scaffold_878_25
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

24000..24923
DNA (924bp) protein (308aa)
Electron transfer flavoprotein FixB n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JH39_9ACTO
fixB; electron transfer flavoprotein subunit alpha
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_cont_300_bf_scaffold_878_26
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

24920..26236
DNA (1317bp) protein (439aa)
fixC; electron transfer flavoprotein FixC (EC:1.5.5.-)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036451AE
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_cont_300_bf_scaffold_878_27
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

26242..26517
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036A5FCB
fixX; Ferredoxin-like protein fixX
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_cont_300_bf_scaffold_878_28
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26498..27253)
DNA (756bp) protein (252aa)
Putative HTH-type transcriptional regulator n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S2J1_ACTS5
Uncharacterized protein {ECO:0000313|EMBL:KEP23366.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
putative HTH-type transcriptional regulator
SCNpilot_cont_300_bf_scaffold_878_29
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27360..27986)
DNA (627bp) protein (209aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UH70_CELFN
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADG73273.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;"
SCNpilot_cont_300_bf_scaffold_878_30
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27983..28981)
DNA (999bp) protein (333aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UE67_CELFN
cytochrome c biogenesis protein transmembrane region
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:ADG76543.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomon
Displaying items 1-30 of 95 in total

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