ggKbase home page

SCNpilot_cont_300_bf_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 341 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_55_1
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1..2283)
DNA (2283bp) protein (761aa)
Nephrocystin-3 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GT77_9BACT rbh
Nephrocystin-3 {ECO:0000313|EMBL:CCH57106.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
NB-ARC domain-containing protein
SCNpilot_cont_300_bf_scaffold_55_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2395..2955
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A5C69 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42096.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_55_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3029..4417
DNA (1389bp) protein (463aa)
peptidase M28 n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D32A7 rbh
peptidase M28 rbh
Peptidase M28 {ECO:0000313|EMBL:ADB42093.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain
SCNpilot_cont_300_bf_scaffold_55_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4559..5839
DNA (1281bp) protein (427aa)
isopenicillin N-epimerase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035EB7E8 rbh
class V aminotransferase rbh
Aminotransferase class V {ECO:0000313|EMBL:ADB42092.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingua
SCNpilot_cont_300_bf_scaffold_55_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5873..7867
DNA (1995bp) protein (665aa)
peptidase S9 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003742680 rbh
peptidase S9 rbh
Peptidase S9 {ECO:0000313|EMBL:AKD53731.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_55_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8007..8459
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003668CBE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42090.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
SCNpilot_cont_300_bf_scaffold_55_7
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8620..8886
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003704C05
SCNpilot_cont_300_bf_scaffold_55_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9012..9494
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036449B2
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADB40137.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (stra
SCNpilot_cont_300_bf_scaffold_55_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9511..10332)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003640E10 rbh
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADB39115.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (stra
SCNpilot_cont_300_bf_scaffold_55_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10591..11646
DNA (1056bp) protein (352aa)
peptidase S9 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003634DA3 rbh
peptidase S9 prolyl oligopeptidase active site domain-containing protein rbh
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ADB41000.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae;
SCNpilot_cont_300_bf_scaffold_55_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11767..12147
DNA (381bp) protein (127aa)
Fis family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A9DFF
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADB40999.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (stra
SCNpilot_cont_300_bf_scaffold_55_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12144..13190
DNA (1047bp) protein (349aa)
guanylate cyclase n=1 Tax=Spirosoma panaciterrae RepID=UPI000365A23F rbh
adenylate/guanylate cyclase rbh
Adenylate/guanylate cyclase {ECO:0000313|EMBL:ADB40998.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC
SCNpilot_cont_300_bf_scaffold_55_13
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13797..14765
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A61CC rbh
SCNpilot_cont_300_bf_scaffold_55_14
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14818..15393
DNA (576bp) protein (192aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
ribonuclease HII n=1 Tax=Spirosoma panaciterrae RepID=UPI000381254D rbh
ribonuclease HII rbh
SCNpilot_cont_300_bf_scaffold_55_15
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(15437..16630)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036EB0A7 rbh
ATPase; K07133 Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
ATPase
SCNpilot_cont_300_bf_scaffold_55_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16730..17203)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036443E7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD58268.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_55_17
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17323..18342
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000373329C rbh
AraC family transcriptional regulator rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:AKD58269.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolera
SCNpilot_cont_300_bf_scaffold_55_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18374..20542)
DNA (2169bp) protein (723aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003732C41 rbh
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADB42071.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosom
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein rbh
SCNpilot_cont_300_bf_scaffold_55_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20680..21888)
DNA (1209bp) protein (403aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16) rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADB42072.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ADB42072.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosom
acetyl-CoA acetyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI000375B819 rbh
SCNpilot_cont_300_bf_scaffold_55_20
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22107..23108)
DNA (1002bp) protein (334aa)
Hedgehog/intein hint domain protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000373AFD4 rbh
Hedgehog/intein hint domain-containing protein rbh
Hedgehog/intein hint domain protein {ECO:0000313|EMBL:ADB42087.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spiro
SCNpilot_cont_300_bf_scaffold_55_21
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23168..24742)
DNA (1575bp) protein (525aa)
L-amino-acid oxidase (EC:1.4.3.2) rbh
L-amino-acid oxidase {ECO:0000313|EMBL:ADB42088.1}; EC=1.4.3.2 {ECO:0000313|EMBL:ADB42088.1};; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae
amino acid oxidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D4B6A rbh
SCNpilot_cont_300_bf_scaffold_55_22
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24839..26011)
DNA (1173bp) protein (391aa)
aminotransferase class I/II n=1 Tax=Spirosoma panaciterrae RepID=UPI0003673BAD rbh
aminotransferase class I/II rbh
Aminotransferase class I/II {ECO:0000313|EMBL:AKD53729.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_55_23
unknown

Not on your lists

comp(26039..26185)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_55_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26453..27385
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D82C0 rbh
metallophosphoesterase rbh
Metallophosphoesterase {ECO:0000313|EMBL:ADB36329.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale
SCNpilot_cont_300_bf_scaffold_55_25
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27567..28877
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B5DC4 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD55078.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_55_26
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29049..30701
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000380D69B rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD58432.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_55_27
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30979..33768
DNA (2790bp) protein (930aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI00037B9633 rbh
TonB-dependent receptor {ECO:0000313|EMBL:AKD55165.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
TonB-dependent receptor rbh
SCNpilot_cont_300_bf_scaffold_55_28
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33832..35097
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000363837E rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB38419.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_55_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35220..36257
DNA (1038bp) protein (346aa)
3-phytase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003623BB6 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB38420.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_55_30
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36426..36659)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003671409
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36577.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
Displaying items 1-30 of 341 in total

View Taxonomy