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SCNpilot_cont_300_bf_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 245 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_124_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1..525)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036DD92C
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ADB36340.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingua
SCNpilot_cont_300_bf_scaffold_124_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(934..3894)
DNA (2961bp) protein (987aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI00035FE342
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AKD54316.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_124_3
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4342..4632
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003785946
SCNpilot_cont_300_bf_scaffold_124_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4723..5028)
DNA (306bp) protein (102aa)
Thioredoxin n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QU59_SPILD
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74
SCNpilot_cont_300_bf_scaffold_124_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5117..6502)
DNA (1386bp) protein (462aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E7562 rbh
3,4-dihydroxy-2-butanone 4-phosphate synthase rbh
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spiroso
SCNpilot_cont_300_bf_scaffold_124_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6608..8638
DNA (2031bp) protein (677aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000379BAC6 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD57072.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_124_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8957..9286
DNA (330bp) protein (110aa)
DNA-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00038176F9
hypothetical protein
Nucleoid-associated protein Slin_6386 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale
SCNpilot_cont_300_bf_scaffold_124_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9373..10407
DNA (1035bp) protein (345aa)
glycosyl transferase family 2 n=1 Tax=Spirosoma panaciterrae RepID=UPI00036EE835 rbh
glycosyl transferase family 2 rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:AKD57070.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_124_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10487..10708)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QU64_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42346.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
SCNpilot_cont_300_bf_scaffold_124_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11048..11248
DNA (201bp) protein (67aa)
cold-shock protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003623674
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADB42347.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (st
SCNpilot_cont_300_bf_scaffold_124_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11324..13027)
DNA (1704bp) protein (568aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|SAAS:SAAS00105438}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|SAAS:SAAS00105438};; Lysyl-tRNA synthetase {ECO:0000256|H
lysyl-tRNA synthetase n=1 Tax=Spirosoma panaciterrae RepID=UPI000381DA61 rbh
lysyl-tRNA synthetase rbh
SCNpilot_cont_300_bf_scaffold_124_12
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13310..14329)
DNA (1020bp) protein (340aa)
alcohol dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003699B8E rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:CCH51754.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma
alcohol dehydrogenase GroES domain-containing protein rbh
SCNpilot_cont_300_bf_scaffold_124_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14386..15177)
DNA (792bp) protein (264aa)
short-chain dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037EF52B rbh
short chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT96833.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermen
SCNpilot_cont_300_bf_scaffold_124_14
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15349..15732)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003685150
dTDP-6-deoxy-3,4-keto-hexulose isomerase {ECO:0000313|EMBL:KFF08277.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="
WxcM-like protein
SCNpilot_cont_300_bf_scaffold_124_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15783..17036)
DNA (1254bp) protein (418aa)
fucose permease n=1 Tax=Spirosoma panaciterrae RepID=UPI000376DFD0 rbh
L-fucose transporter
L-fucose transporter {ECO:0000313|EMBL:ADB37309.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (
SCNpilot_cont_300_bf_scaffold_124_16
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17501..18349
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035FFA31 rbh
Band 7 protein {ECO:0000313|EMBL:CCH54055.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
band 7 protein rbh
SCNpilot_cont_300_bf_scaffold_124_17
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18646..19332)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036BE3F2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD57080.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_124_18
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19707..20543)
DNA (837bp) protein (279aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI000381467D rbh
transcriptional regulator rbh
SCNpilot_cont_300_bf_scaffold_124_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(20641..21330)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C13B5 rbh
peptidase M22 glycoprotease rbh
Peptidase M22 glycoprotease {ECO:0000313|EMBL:ADB42352.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC
SCNpilot_cont_300_bf_scaffold_124_20
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21430..23088)
DNA (1659bp) protein (553aa)
carboxyl-terminal protease (EC:3.4.21.102) rbh
Carboxyl-terminal protease {ECO:0000313|EMBL:ADB39913.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ADB39913.1};; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyto
peptidase S41 n=1 Tax=Spirosoma panaciterrae RepID=UPI00038234F9 rbh
SCNpilot_cont_300_bf_scaffold_124_21
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23159..23566)
DNA (408bp) protein (136aa)
Ribonuclease P protein component {ECO:0000256|SAAS:SAAS00143752}; EC=3.1.26.5 {ECO:0000256|SAAS:SAAS00143815};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae;
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036837AD
hypothetical protein
SCNpilot_cont_300_bf_scaffold_124_22
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23975..25534
DNA (1560bp) protein (520aa)
peptidase M61 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003827029 rbh
peptidase M61 domain-containing protein rbh
Peptidase M61 domain protein {ECO:0000313|EMBL:ADB39910.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC
SCNpilot_cont_300_bf_scaffold_124_23
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25667..26758
DNA (1092bp) protein (364aa)
glycosidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036FD0D2 rbh
glycosidase PH1107-like protein rbh
Glycosidase PH1107-related protein {ECO:0000313|EMBL:ADB39909.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spiros
SCNpilot_cont_300_bf_scaffold_124_24
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26980..27549
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000375F0F7
SCNpilot_cont_300_bf_scaffold_124_25
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28025..29011
DNA (987bp) protein (329aa)
cytochrome C n=1 Tax=Spirosoma panaciterrae RepID=UPI0003616DBF rbh
cytochrome c-like protein rbh
Cytochrome c-related protein {ECO:0000313|EMBL:AEI48823.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithy
SCNpilot_cont_300_bf_scaffold_124_26
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29267..29968
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WVM8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06493.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
SCNpilot_cont_300_bf_scaffold_124_27
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30216..31118
DNA (903bp) protein (301aa)
Aldo/keto reductase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YC75_9SPHI rbh
Aldo/keto reductase {ECO:0000313|EMBL:EHQ29638.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacte
aldo/keto reductase
SCNpilot_cont_300_bf_scaffold_124_28
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31119..31928
DNA (810bp) protein (270aa)
Helix-turn-helix, AraC domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YC76_9SPHI rbh
AraC family transcriptional regulator rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:AKD56620.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolera
SCNpilot_cont_300_bf_scaffold_124_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31958..34714)
DNA (2757bp) protein (919aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003780492 rbh
malto-oligosyltrehalose synthase
SCNpilot_cont_300_bf_scaffold_124_30
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34961..36820)
DNA (1860bp) protein (620aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucan
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C3E04 rbh
malto-oligosyltrehalose trehalohydrolase rbh
Displaying items 1-30 of 245 in total

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