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SCNpilot_cont_300_bf_scaffold_184

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_184_1
unknown

Not on your lists

1..192
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_184_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(270..2294)
DNA (2025bp) protein (675aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" so
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ1_9BACT rbh
histidine kinase
SCNpilot_cont_300_bf_scaffold_184_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2318..3052)
DNA (735bp) protein (245aa)
Putative response regulatory protein ypdB n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ2_9BACT rbh
Putative response regulatory protein ypdB {ECO:0000313|EMBL:CCH54217.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BU
LytTR family two component transcriptional regulator
SCNpilot_cont_300_bf_scaffold_184_4
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3218..4090
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K6F7_9BACT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCG99710.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_184_5
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4108..4659
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K6F4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG99707.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_184_6
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4878..5648
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D2143 rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM73280.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. Az
3-oxoacyl-ACP reductase
SCNpilot_cont_300_bf_scaffold_184_7
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5683..6783)
DNA (1101bp) protein (367aa)
two-component hybrid sensor and regulator (EC:2.7.13.3) rbh
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:CCH02710.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCH02710.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophaga
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000378F032 rbh
SCNpilot_cont_300_bf_scaffold_184_8
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6833..10582)
DNA (3750bp) protein (1250aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CCH02709.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; C
Nodulation protein V (EC:2.7.13.3) rbh
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037993DC rbh
SCNpilot_cont_300_bf_scaffold_184_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10617..11360)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000382C771 rbh
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADB37088.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (stra
SCNpilot_cont_300_bf_scaffold_184_10
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11816..12667)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000370BE8A rbh
peptidase M12
Peptidase M12 {ECO:0000313|EMBL:AKD58681.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_184_11
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12657..13130)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000367AE4B
Response regulator receiver protein {ECO:0000313|EMBL:CCH55472.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
response regulator receiver protein
SCNpilot_cont_300_bf_scaffold_184_12
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13428..14123)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00035E51BF rbh
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABK19233.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Synt
SCNpilot_cont_300_bf_scaffold_184_13
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14636..15481)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003786233 rbh
NHL repeat containing protein rbh
NHL repeat containing protein {ECO:0000313|EMBL:AKD57895.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_184_14
unknown

Not on your lists

comp(15478..15699)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_184_15
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15723..16094
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036FF88A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD55550.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_184_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16158..16619)
DNA (462bp) protein (154aa)
endoribonuclease L-PSP n=1 Tax=Spirosoma panaciterrae RepID=UPI0003653188 rbh
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AKD58218.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_184_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16707..17954)
DNA (1248bp) protein (416aa)
dihydroorotase n=1 Tax=Spirosoma panaciterrae RepID=UPI000375FE00 rbh
amidohydrolase rbh
Amidohydrolase {ECO:0000313|EMBL:ADB39955.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain
SCNpilot_cont_300_bf_scaffold_184_18
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17992..19212)
DNA (1221bp) protein (407aa)
L-seryl-tRNA(Ser) seleniumtransferase (EC:2.9.1.1) rbh
L-seryl-tRNA(Ser) seleniumtransferase {ECO:0000313|EMBL:CCG98131.1}; EC=2.9.1.1 {ECO:0000313|EMBL:CCG98131.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae;
selenocysteine synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI000374C117 rbh
SCNpilot_cont_300_bf_scaffold_184_19
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19466..19906)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003675B91
Endoribonuclease L-PSP {ECO:0000313|EMBL:EON75242.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacter
endoribonuclease L-PSP
SCNpilot_cont_300_bf_scaffold_184_20
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19919..21481)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372B676 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB39951.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_184_21
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21500..24613)
DNA (3114bp) protein (1038aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI0003764F8C rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ADB39950.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma li
TonB-dependent receptor plug rbh
SCNpilot_cont_300_bf_scaffold_184_22
unknown

Not on your lists

24776..24913
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_184_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25058..25816
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000367E1EF rbh
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AEW03475.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niaste
SCNpilot_cont_300_bf_scaffold_184_24
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25998..27032)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003699E68 rbh
hydrolase rbh
Hydrolase {ECO:0000313|EMBL:AKD58447.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_184_25
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27186..28226)
DNA (1041bp) protein (347aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cyt
DNA-directed DNA polymerase (EC:2.7.7.7) rbh
DNA polymerase IV n=1 Tax=Spirosoma panaciterrae RepID=UPI0003624895 rbh
SCNpilot_cont_300_bf_scaffold_184_26
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28480..28818
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000363ED03
PadR family transcriptional regulator
PadR family transcriptional regulator {ECO:0000313|EMBL:AKD56599.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolera
SCNpilot_cont_300_bf_scaffold_184_27
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28815..31496
DNA (2682bp) protein (894aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003770404 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD58627.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_184_28
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31605..32456)
DNA (852bp) protein (284aa)
xylose isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003765A91 rbh
endonuclease rbh
Endonuclease {ECO:0000313|EMBL:AKD58628.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_184_29
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32544..33788)
DNA (1245bp) protein (415aa)
Macrolide export ATP-binding/permease protein macB (EC:3.6.3.-) rbh
Macrolide export ATP-binding/permease protein macB {ECO:0000313|EMBL:CCG98105.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCG98105.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; C
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368D6CA rbh
SCNpilot_cont_300_bf_scaffold_184_30
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33975..34523
DNA (549bp) protein (183aa)
DNA-3-methyladenine glycosylase n=1 Tax=Spirosoma panaciterrae RepID=UPI000363097D rbh
methyladenine glycosylase rbh
Methyladenine glycosylase {ECO:0000313|EMBL:AFK02277.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DS
Displaying items 1-30 of 116 in total

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