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SCNpilot_cont_300_bf_scaffold_217

Search features with annotation key words

Displaying items 1-30 of 193 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_217_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3..638)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D8A57
Ig family protein
Ig family protein {ECO:0000313|EMBL:ADB39794.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (str
SCNpilot_cont_300_bf_scaffold_217_2
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1250..1933)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D8A57
quinoprotein (ISS) Tax=GWF2_Bacteroidetes_38_335_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_217_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3400..7587)
DNA (4188bp) protein (1396aa)
Hybrid signal transduction histidine kinase D {ECO:0000313|EMBL:CCH53101.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCH53101.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytop
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037AEC71 rbh
histidine kinase rbh
SCNpilot_cont_300_bf_scaffold_217_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7827..10352)
DNA (2526bp) protein (842aa)
alanine racemase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003619A67 rbh
alanine racemase rbh
Alanine racemase {ECO:0000313|EMBL:AKD55626.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_217_5
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10454..11608)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E867F rbh
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
magnesium and cobalt transport protein CorA
SCNpilot_cont_300_bf_scaffold_217_6
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11714..12910
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E1B33 rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH53349.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_217_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12916..14352)
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000371D831 rbh
Peptidase S41 {ECO:0000313|EMBL:CCH52189.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
periplasmic protease
SCNpilot_cont_300_bf_scaffold_217_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14454..15287)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E6F7D rbh
Putative response regulatory protein VV2_1193 {ECO:0000313|EMBL:CCH52188.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma lim
LytTR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_217_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15268..16314)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000380ACDC rbh
Sensor protein lytS {ECO:0000313|EMBL:CCH52187.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
signal transduction histidine kinase LytS rbh
SCNpilot_cont_300_bf_scaffold_217_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16473..17099
DNA (627bp) protein (209aa)
iron-sulfur cluster assembly protein HesB n=1 Tax=Spirosoma panaciterrae RepID=UPI000370697A rbh
HhH-GPD family protein rbh
HhH-GPD family protein {ECO:0000313|EMBL:ADB38290.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905
SCNpilot_cont_300_bf_scaffold_217_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17185..17562)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003673E58
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36420.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_217_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17599..21051)
DNA (3453bp) protein (1151aa)
cytochrome C n=1 Tax=Spirosoma panaciterrae RepID=UPI0003648471 rbh
cytochrome C rbh
Cytochrome C {ECO:0000313|EMBL:AKD56422.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_217_13
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21090..21959)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A433F rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFK03350.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotr
SCNpilot_cont_300_bf_scaffold_217_14
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22135..22860
DNA (726bp) protein (242aa)
NUDIX hydrolase n=1 Tax=Rudanella lutea RepID=UPI000375B55F rbh
NUDIX hydrolase rbh
NUDIX hydrolase {ECO:0000313|EMBL:AFK03349.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 /
SCNpilot_cont_300_bf_scaffold_217_15
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23028..23357)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KDH3_9BACT
hypothetical protein
SCNpilot_cont_300_bf_scaffold_217_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23659..25053)
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003789E1E rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD55630.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_217_17
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25106..25264)
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000379EBC5
Uncharacterized protein {ECO:0000313|EMBL:EJF08726.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
SCNpilot_cont_300_bf_scaffold_217_18
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25361..25897)
DNA (537bp) protein (179aa)
hydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI000378BB62 rbh
metal-dependent hydrolase rbh
Metal-dependent hydrolase {ECO:0000313|EMBL:AKD55631.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_217_19
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25998..26798)
DNA (801bp) protein (267aa)
inositol-1-monophosphatase n=1 Tax=Spirosoma panaciterrae RepID=UPI000382975B rbh
inositol-1-monophosphatase rbh
Inositol-1-monophosphatase {ECO:0000313|EMBL:AKD55632.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_217_20
Synechococcus sp. PCC 7002, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26865..27206)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036373A1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA99400.1}; TaxID=32049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27264
SCNpilot_cont_300_bf_scaffold_217_21
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27288..29546)
DNA (2259bp) protein (753aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
phosphoribosylglycinamide synthetase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003647B41 rbh
phosphoribosylformylglycinamidine synthase rbh
SCNpilot_cont_300_bf_scaffold_217_22
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30061..31338
DNA (1278bp) protein (426aa)
Tyrosine type site-specific recombinase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KBX3_9BACT
tyrosine type site-specific recombinase
Tyrosine type site-specific recombinase {ECO:0000313|EMBL:CCH01626.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina
SCNpilot_cont_300_bf_scaffold_217_23
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31828..32148
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037EFB67
SCNpilot_cont_300_bf_scaffold_217_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32255..32824
DNA (570bp) protein (190aa)
PKD domain containing protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QGC9_SPILD
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ADB36736.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma l
SCNpilot_cont_300_bf_scaffold_217_25
unknown

Not on your lists

comp(32884..33150)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_217_26
unknown

Not on your lists

comp(33190..33525)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_217_27
unknown

Not on your lists

comp(33538..34146)
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_217_28
unknown

Not on your lists

comp(34150..34638)
DNA (489bp) protein (163aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_217_29
unknown

Not on your lists

comp(34649..35110)
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_217_30
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35110..36096)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9S9_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY51435.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedob
Displaying items 1-30 of 193 in total

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