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SCNpilot_cont_300_bf_scaffold_228

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_228_1
Eikenella corrodens, Eikenella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

311..769
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Eikenella corrodens CC92I RepID=V7IH50_EIKCO
Uncharacterized protein {ECO:0000313|EMBL:ETA84212.1}; TaxID=1073362 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Eikenella.;" source="Eikenella corrodens CC92I.
SCNpilot_cont_300_bf_scaffold_228_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1735..2724
DNA (990bp) protein (330aa)
Mitochondrial metalloendopeptidase OMA1 {ECO:0000313|EMBL:CCH52482.1}; EC=3.4.24.- {ECO:0000313|EMBL:CCH52482.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagace
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037903C4 rbh
peptidase M48 Ste24p
SCNpilot_cont_300_bf_scaffold_228_3
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3396..6371)
DNA (2976bp) protein (992aa)
glycosyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036F2F18
Glycosyltransferase {ECO:0000313|EMBL:AKD57658.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
glycosyltransferase
SCNpilot_cont_300_bf_scaffold_228_4
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6584..7870)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003713D7E rbh
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_228_5
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7874..9163)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00038193D6 rbh
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_228_6
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9292..10734)
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00038019CD rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain-containing protein {ECO:0000313|EMBL:ADZ78528.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source=
SCNpilot_cont_300_bf_scaffold_228_7
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10749..14060)
DNA (3312bp) protein (1104aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C8F93 rbh
TonB-dependent receptor plug rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ADZ78527.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphing
SCNpilot_cont_300_bf_scaffold_228_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14259..15365)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036DF254 rbh
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:CCH51236.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
anti-FecI sigma factor, FecR
SCNpilot_cont_300_bf_scaffold_228_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15504..16115)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000370CB0B rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH51237.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma l
RNA polymerase, sigma-24 subunit, ECF subfamily
SCNpilot_cont_300_bf_scaffold_228_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16623..16841)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368D587
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB38926.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (s
SCNpilot_cont_300_bf_scaffold_228_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16949..17926)
DNA (978bp) protein (326aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2) rbh
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:ADB38925.1}; EC=6.1.1.2 {ECO:0000313|EMBL:ADB38925.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma
tryptophanyl-tRNA synthetase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003696DAE rbh
SCNpilot_cont_300_bf_scaffold_228_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18035..20302)
DNA (2268bp) protein (756aa)
malic enzyme (EC:1.1.1.40) rbh
Malic enzyme {ECO:0000313|EMBL:AKD58565.1}; EC=1.1.1.40 {ECO:0000313|EMBL:AKD58565.1};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Sp
malic enzyme n=1 Tax=Spirosoma panaciterrae RepID=UPI0003621932 rbh
SCNpilot_cont_300_bf_scaffold_228_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20377..21408)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368478D rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38923.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
SCNpilot_cont_300_bf_scaffold_228_14
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21601..22089)
DNA (489bp) protein (163aa)
thioesterase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A6436
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADB38922.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain
SCNpilot_cont_300_bf_scaffold_228_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22127..22798
DNA (672bp) protein (224aa)
phosphoglycerate mutase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C4780 rbh
phosphoglycerate mutase rbh
Phosphoglycerate mutase {ECO:0000313|EMBL:ADB38921.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
SCNpilot_cont_300_bf_scaffold_228_16
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22943..24037
DNA (1095bp) protein (365aa)
histidine kinase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037DBC8C rbh
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ADB38920.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_228_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24119..24853
DNA (735bp) protein (245aa)
transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F9071 rbh
LytTR family transcriptional regulator rbh
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADB38919.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spiros
SCNpilot_cont_300_bf_scaffold_228_18
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24936..25736
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003662041 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD56101.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_228_19
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26088..27416
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000362EA46 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD56100.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_228_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27413..27700
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003617A24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD56099.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_228_21
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27729..29165)
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000364D1D0 rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH55442.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
type 12 methyltransferase
SCNpilot_cont_300_bf_scaffold_228_22
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29306..30844
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003715F19 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH55441.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_300_bf_scaffold_228_23
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30864..31346)
DNA (483bp) protein (161aa)
globin n=1 Tax=Spirosoma panaciterrae RepID=UPI0003708022 rbh
globin
Globin {ECO:0000313|EMBL:ADB38916.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG
SCNpilot_cont_300_bf_scaffold_228_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31504..32637)
DNA (1134bp) protein (378aa)
alanine dehydrogenase (EC:1.4.1.1) rbh
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;"
alanine dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003783CC4 rbh
SCNpilot_cont_300_bf_scaffold_228_25
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32810..33271
DNA (462bp) protein (154aa)
AsnC family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI000365AD69
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:AKD56096.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolera
SCNpilot_cont_300_bf_scaffold_228_26
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33363..34079
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003623222 rbh
DSBA oxidoreductase rbh
DSBA oxidoreductase {ECO:0000313|EMBL:AKD55834.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_228_27
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

34278..35240
DNA (963bp) protein (321aa)
galactose oxidase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003742FC2 rbh
Kelch repeat-containing protein rbh
Kelch repeat-containing protein {ECO:0000313|EMBL:ADB38912.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma
SCNpilot_cont_300_bf_scaffold_228_28
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35271..36167
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E126E rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB38911.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_228_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36198..37364
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003709241 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB38910.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
SCNpilot_cont_300_bf_scaffold_228_30
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37496..38251
DNA (756bp) protein (252aa)
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:CCH54776.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CCH54776.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophag
short-chain dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037860C2 rbh
3-oxoacyl-ACP reductase rbh
Displaying items 1-30 of 123 in total

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