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SCNpilot_cont_300_bf_scaffold_255

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_255_1
unknown

Not on your lists

1..90
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_255_2
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1302..4052
DNA (2751bp) protein (917aa)
hypothetical protein, partial n=1 Tax=Spirosoma panaciterrae RepID=UPI0003713AA0 rbh
outer membrane adhesin-like protein
Outer membrane adhesin like proteiin {ECO:0000313|EMBL:AEI51420.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (str
SCNpilot_cont_300_bf_scaffold_255_3
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4113..10382
DNA (6270bp) protein (2090aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035FF9DB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK04147.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotr
SCNpilot_cont_300_bf_scaffold_255_4
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10454..11278
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003795E4D rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49994.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
SCNpilot_cont_300_bf_scaffold_255_5
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11357..13399
DNA (2043bp) protein (681aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000370C301 rbh
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:AEI49739.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain A
SCNpilot_cont_300_bf_scaffold_255_6
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13405..14973
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003795811 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ97026.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
SCNpilot_cont_300_bf_scaffold_255_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15203..15607
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036EB735
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD53804.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_255_8
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15797..16693)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B0BE6 rbh
SCNpilot_cont_300_bf_scaffold_255_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17589..18140)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E5F3A rbh
WGS project CAIT00000000 data, contig 7 {ECO:0000313|EMBL:CCH54868.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ
RNA polymerase, sigma-24 subunit, ECF subfamily
SCNpilot_cont_300_bf_scaffold_255_10
unknown

Not on your lists

18333..18539
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_255_11
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19029..19316
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F457D
SCNpilot_cont_300_bf_scaffold_255_12
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19704..22058)
DNA (2355bp) protein (785aa)
Putative uncharacterized protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21P31_SACD2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD79548.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus
SCNpilot_cont_300_bf_scaffold_255_13
Pseudomonas sp. GM16, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22049..23104)
DNA (1056bp) protein (352aa)
Flavin-dependent dehydrogenase n=2 Tax=Pseudomonas RepID=J3DN19_9PSED
Flavin-dependent dehydrogenase {ECO:0000313|EMBL:EJL95371.1}; TaxID=1144322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
FAD dependent oxidoreductase
SCNpilot_cont_300_bf_scaffold_255_14
unknown

Not on your lists

23491..23724
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_255_15
unknown

Not on your lists

comp(23976..24086)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_255_16
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24556..24678)
DNA (123bp) protein (41aa)
membrane protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035ED81A
hypothetical protein Tax=CG_Flavo_01
hypothetical protein
SCNpilot_cont_300_bf_scaffold_255_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24967..26664
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000377C0CC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41287.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_255_18
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26694..27086)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A5AB2
DNA/RNA non-specific endonuclease
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:CCH02003.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.
SCNpilot_cont_300_bf_scaffold_255_19
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27432..28229)
DNA (798bp) protein (266aa)
enoyl-CoA hydratase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003778D1E rbh
enoyl-CoA hydratase rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:AKD54593.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_255_20
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28282..28995)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372B807 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB36693.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_255_21
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29026..30474)
DNA (1449bp) protein (483aa)
RNA polymerase sigma54 factor n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E5307 rbh
RNA polymerase sigma54 factor rbh
RNA polymerase sigma54 factor {ECO:0000313|EMBL:AKD54595.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_255_22
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30606..32108
DNA (1503bp) protein (501aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1379870 species=
nicotinate phosphoribosyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A2701 rbh
nicotinate phosphoribosyltransferase rbh
SCNpilot_cont_300_bf_scaffold_255_23
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32458..34209
DNA (1752bp) protein (584aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C4C9C rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD54308.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_255_24
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

34223..34960
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000364AE76 rbh
two component transcriptional regulator, LytTR family protein rbh
Two component transcriptional regulator, LytTR family protein {ECO:0000313|EMBL:AKD54309.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" sourc
SCNpilot_cont_300_bf_scaffold_255_25
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35114..35851
DNA (738bp) protein (246aa)
phosphatase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A1FD1 rbh
haloacid dehalogenase rbh
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ADB39410.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lin
SCNpilot_cont_300_bf_scaffold_255_26
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35873..37024
DNA (1152bp) protein (384aa)
oxidase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003703788 rbh
oxidase rbh
Oxidase {ECO:0000313|EMBL:AKD56687.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_255_27
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37190..40495
DNA (3306bp) protein (1102aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F111A rbh
TonB-dependent receptor {ECO:0000313|EMBL:AKD56686.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
TonB-dependent receptor rbh
SCNpilot_cont_300_bf_scaffold_255_28
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

40553..42124
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035EF31A rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD56685.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_255_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

42344..43264
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A7021 rbh
metallophosphoesterase rbh
Metallophosphoesterase {ECO:0000313|EMBL:ADB39406.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale
SCNpilot_cont_300_bf_scaffold_255_30
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

43268..43816
DNA (549bp) protein (183aa)
phosphohydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036598CF rbh
phosphohydrolase rbh
Phosphohydrolase {ECO:0000313|EMBL:AKD56684.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Displaying items 1-30 of 90 in total

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