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SCNpilot_cont_300_bf_scaffold_377

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_377_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

390..1409
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000375021E rbh
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEI51227.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC
SCNpilot_cont_300_bf_scaffold_377_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1598..5167
DNA (3570bp) protein (1190aa)
collagen-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003628A81 rbh
TonB-dependent receptor plug rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ADB40738.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma li
SCNpilot_cont_300_bf_scaffold_377_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5186..6973
DNA (1788bp) protein (596aa)
starch-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037EA1F4 rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain protein {ECO:0000313|EMBL:ADB40739.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingua
SCNpilot_cont_300_bf_scaffold_377_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7056..7895
DNA (840bp) protein (280aa)
endonuclease/exonuclease/phosphatase n=1 Tax=Spirosoma panaciterrae RepID=UPI000368BD0B rbh
endonuclease/exonuclease/phosphatase rbh
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ADB40740.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spir
SCNpilot_cont_300_bf_scaffold_377_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7985..9250)
DNA (1266bp) protein (422aa)
N-acylglucosamine 2-epimerase n=1 Tax=Spirosoma panaciterrae RepID=UPI000361D432 rbh
N-acylglucosamine 2-epimerase rbh
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:ADB42339.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATC
SCNpilot_cont_300_bf_scaffold_377_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9243..10253)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037050C5 rbh
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ADB42338.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 /
SCNpilot_cont_300_bf_scaffold_377_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10567..11646
DNA (1080bp) protein (360aa)
O-methyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI000368DD0A rbh
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AKD57081.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_377_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11710..12990
DNA (1281bp) protein (427aa)
MFS transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C946B rbh
MFS transporter
MFS transporter {ECO:0000313|EMBL:AKD54196.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_377_9
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

13175..13636
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU53_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB76619.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-
SCNpilot_cont_300_bf_scaffold_377_10
unknown

Not on your lists

comp(13571..13870)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_377_11
Leptospira weilii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

14061..14630
DNA (570bp) protein (190aa)
dihydrofolate reductase n=1 Tax=Segetibacter koreensis RepID=UPI000369E229 rbh
Riboflavin biosynthesis protein RibD C-terminal domain protein {ECO:0000313|EMBL:EMF81930.1}; TaxID=1088540 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptos
folA; dihydrofolate reductase-like protein
SCNpilot_cont_300_bf_scaffold_377_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14661..15209)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003664BEA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42327.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_377_13
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15257..16807)
DNA (1551bp) protein (517aa)
Beta-Ala-His dipeptidase (EC:3.4.13.20)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037EFE43 rbh
Acetylornithine deacetylase {ECO:0000313|EMBL:EMS31431.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyt
SCNpilot_cont_300_bf_scaffold_377_14
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16989..18644
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C8CA1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJG03208.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_377_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18690..19241)
DNA (552bp) protein (184aa)
fasciclin n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D81F6 rbh
beta-Ig-H3/fasciclin rbh
Beta-Ig-H3/fasciclin {ECO:0000313|EMBL:ADB40232.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (
SCNpilot_cont_300_bf_scaffold_377_16
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19747..20088
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036ED783
SCNpilot_cont_300_bf_scaffold_377_17
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20098..20751
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037948C5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH03205.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_377_18
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20755..21594
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D0B32 rbh
histidine kinase rbh
Histidine kinase {ECO:0000313|EMBL:AKD57094.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_377_19
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21647..22306
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A81B6 rbh
ligand-binding protein SH3
Ligand-binding protein SH3 {ECO:0000313|EMBL:AKD57093.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_377_20
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22382..23407
DNA (1026bp) protein (342aa)
L-Ala-DL-Glu epimerase n=1 Tax=Spirosoma panaciterrae RepID=UPI000370FB08 rbh
muconate lactonizing mandelate racemase protein rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADB42308.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma li
SCNpilot_cont_300_bf_scaffold_377_21
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23418..24494
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037EBAF6 rbh
class I and II aminotransferase rbh
Aminotransferase class I and II {ECO:0000313|EMBL:ADB42309.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain A
SCNpilot_cont_300_bf_scaffold_377_22
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24561..25394)
DNA (834bp) protein (278aa)
xylose isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003677E6F rbh
sugar phosphate isomerase rbh
Sugar phosphate isomerase {ECO:0000313|EMBL:AKD57089.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_377_23
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25422..26336)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003719234 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB42311.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
SCNpilot_cont_300_bf_scaffold_377_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26539..27795
DNA (1257bp) protein (419aa)
MFS transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A2E63 rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADB40364.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spiro
SCNpilot_cont_300_bf_scaffold_377_25
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28065..29561
DNA (1497bp) protein (499aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;"
arabinose isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A0289 rbh
L-fucose isomerase-like protein rbh
SCNpilot_cont_300_bf_scaffold_377_26
unknown

Not on your lists

29582..29704
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_377_27
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29722..32916
DNA (3195bp) protein (1065aa)
TonB-dependent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI0003745C7E rbh
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:ADB40362.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_377_28
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33041..34477
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036ED82D rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain protein {ECO:0000313|EMBL:ADB40361.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingua
SCNpilot_cont_300_bf_scaffold_377_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

34565..37105
DNA (2541bp) protein (847aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000365D879 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB40360.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_377_30
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37314..40058
DNA (2745bp) protein (915aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D9489 rbh
glycoside hydrolase Tax=GWA2_Bacteroidetes_40_15_curated
glycoside hydrolase
Displaying items 1-30 of 106 in total

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