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SCNpilot_cont_300_bf_scaffold_940

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_940_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

697..1395
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000376D5EB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38904.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_940_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1410..2297)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F04A0 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD56038.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_940_3
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2356..4092)
DNA (1737bp) protein (579aa)
alpha-amylase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FF337 rbh
alpha-amylase rbh
Alpha-amylase {ECO:0000313|EMBL:AKD56037.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_940_4
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4186..6069
DNA (1884bp) protein (628aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035C9D30 rbh
alpha-amylase rbh
Alpha-amylase {ECO:0000313|EMBL:AIZ63177.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
SCNpilot_cont_300_bf_scaffold_940_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6159..7742
DNA (1584bp) protein (528aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" sou
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003732249 rbh
PAS/PAC sensor signal transduction histidine kinase rbh
SCNpilot_cont_300_bf_scaffold_940_6
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7833..8243
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037ACB4B
SCNpilot_cont_300_bf_scaffold_940_7
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8309..9688)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003619FEC rbh
creD; Inner membrane protein creD rbh
Inner membrane protein creD {ECO:0000313|EMBL:CCH02244.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_940_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9831..10484
DNA (654bp) protein (218aa)
beta-phosphoglucomutase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C123F rbh
beta-phosphoglucomutase rbh
Beta-phosphoglucomutase {ECO:0000313|EMBL:AKD58556.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_940_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10666..13200)
DNA (2535bp) protein (845aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003736C00 rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB38889.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_940_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13488..14198)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B94E8 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB38887.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_940_11
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14749..15309)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036B072F
Uncharacterized protein {ECO:0000313|EMBL:EOR94334.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter
cupin
SCNpilot_cont_300_bf_scaffold_940_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15703..16665
DNA (963bp) protein (321aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W350_DYAFD rbh
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACT92154.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans
SCNpilot_cont_300_bf_scaffold_940_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16695..17495
DNA (801bp) protein (267aa)
Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W349_DYAFD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT96653.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
SCNpilot_cont_300_bf_scaffold_940_14
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17582..18097)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000361D415 rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EOR95981.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source
hypothetical protein
SCNpilot_cont_300_bf_scaffold_940_15
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18100..18438)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000361D415
SCNpilot_cont_300_bf_scaffold_940_16
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18435..18863)
DNA (429bp) protein (143aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EOR95982.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EOR95982.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteria
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003679865
short-chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_940_17
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18873..19244)
DNA (372bp) protein (124aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EOR95982.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EOR95982.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteria
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003679865
short-chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_940_18
Aphanizomenon flos-aquae, Aphanizomenon, Nostocales, Cyanobacteria, Bacteria

Not on your lists

19518..20051
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000382F2EF
Transposase {ECO:0000313|EMBL:KHG40226.1}; TaxID=1532906 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Aphanizomenon.;" source="Aphanizomenon flos-aquae 2012/KM1/D3.;"
transposase IS4 family protein
SCNpilot_cont_300_bf_scaffold_940_19
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19999..20430
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000382F2EF
Microcystis aeruginosa PCC 7806 genome sequencing data, contig C327 {ECO:0000313|EMBL:CAO91283.1}; Similar to tr|Q8YZ89|Q8YZ89 {ECO:0000313|EMBL:CAO89046.1}; TaxID=267872 species="Bacteria; Cyanobacte
transposase IS4 family protein
SCNpilot_cont_300_bf_scaffold_940_20
unknown

Not on your lists

comp(20346..20528)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_940_21
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20525..22645)
DNA (2121bp) protein (707aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDW0_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH52084.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_940_22
unknown

Not on your lists

comp(22678..23292)
DNA (615bp) protein (205aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_940_23
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23289..29129)
DNA (5841bp) protein (1947aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDV8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH52082.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_940_24
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29126..30817)
DNA (1692bp) protein (564aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003760D31
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16449.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterel
SCNpilot_cont_300_bf_scaffold_940_25
unknown

Not on your lists

comp(31162..31695)
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_940_26
unknown

Not on your lists

31701..31913
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_940_27
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(31837..33459)
DNA (1623bp) protein (541aa)
Putative uncharacterized protein id=4323068 bin=GWF2_Bacteroidetes_41_61 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_cont_300_bf_scaffold_940_28
unknown

Not on your lists

comp(33660..34364)
DNA (705bp) protein (235aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_940_29
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34537..35166)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003656445
hypothetical protein
SCNpilot_cont_300_bf_scaffold_940_30
unknown

Not on your lists

comp(35218..35619)
DNA (402bp) protein (134aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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