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SCNpilot_cont_300_bf_scaffold_992

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_992_1
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(243..1109)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E7823 rbh
hypothetical protein
Molybdopterin-guanine dinucleotide biosynthesis protein MobB {ECO:0000313|EMBL:KIA96224.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; P
SCNpilot_cont_300_bf_scaffold_992_2
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1129..1242)
DNA (114bp) protein (38aa)
hypothetical protein, partial n=1 Tax=Spirosoma panaciterrae RepID=UPI00036AE743
SCNpilot_cont_300_bf_scaffold_992_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

1349..2047
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI0003620E9C
plasmid pRiA4b ORF-3 family protein
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:ABX07816.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosip
SCNpilot_cont_300_bf_scaffold_992_4
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2113..2634
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000364F695
Uncharacterized protein {ECO:0000313|EMBL:KFF22358.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
Site-specific recombinases, DNA invertase Pin homologs
SCNpilot_cont_300_bf_scaffold_992_5
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2705..4102
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484CD4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF22357.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_cont_300_bf_scaffold_992_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4321..4593)
DNA (273bp) protein (91aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QQL9_SPILD
XRE family transcriptional regulator
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:ADB40800.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spir
SCNpilot_cont_300_bf_scaffold_992_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4608..5108)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QQL8_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB40799.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
SCNpilot_cont_300_bf_scaffold_992_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5289..5741
DNA (453bp) protein (151aa)
Resolvase, N-terminal n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GU10_9BACT
Resolvase, N-terminal {ECO:0000313|EMBL:CCH57611.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Resolvase domain-containing protein
SCNpilot_cont_300_bf_scaffold_992_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5931..6203
DNA (273bp) protein (91aa)
Transposase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GLQ8_9BACT
Transposase {ECO:0000313|EMBL:CCH54834.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
transposase IS3/IS911 family protein
SCNpilot_cont_300_bf_scaffold_992_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6365..7090
DNA (726bp) protein (242aa)
Integrase catalytic region n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QEQ0_SPILD rbh
integrase catalytic protein rbh
Integrase catalytic region {ECO:0000313|EMBL:ADB38302.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3
SCNpilot_cont_300_bf_scaffold_992_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7116..7355
DNA (240bp) protein (80aa)
Integrase catalytic region n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QEQ0_SPILD
integrase catalytic protein
Integrase catalytic region {ECO:0000313|EMBL:ADB38302.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3
SCNpilot_cont_300_bf_scaffold_992_12
unknown

Not on your lists

comp(7341..7595)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_992_13
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7723..8511)
DNA (789bp) protein (263aa)
Esterase/lipase-like protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KEI8_9BACT
esterase/lipase-like protein
Esterase/lipase-like protein {ECO:0000313|EMBL:CCH02541.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_992_14
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8645..9619)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESY7_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:KIA92495.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_992_15
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9858..11405)
DNA (1548bp) protein (516aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEE52471.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEE52471.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprosp
Long-chain-fatty-acid--CoA ligase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVL4_HALH1 rbh
long-chain-fatty-acid--CoA ligase
SCNpilot_cont_300_bf_scaffold_992_16
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11548..12456)
DNA (909bp) protein (303aa)
AraC family transcriptional regulator n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KEI9_9BACT rbh
pcrR; AraC family transcriptional regulator rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:CCH02542.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BU
SCNpilot_cont_300_bf_scaffold_992_17
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12637..13233)
DNA (597bp) protein (199aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JWK3_9BACT
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ELR71999.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga im
cAMP-binding protein
SCNpilot_cont_300_bf_scaffold_992_18
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13322..14278)
DNA (957bp) protein (319aa)
Nitric oxide-dependent regulator DnrN or NorA n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JT33_9BACT rbh
Nitric oxide-dependent regulator DnrN or NorA {ECO:0000313|EMBL:ELR72005.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirg
iron-sulfur cluster repair di-iron protein
SCNpilot_cont_300_bf_scaffold_992_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14560..15831)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000370BB7E rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB37870.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
SCNpilot_cont_300_bf_scaffold_992_20
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15828..16280)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037AC308
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ADB37871.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingua
SCNpilot_cont_300_bf_scaffold_992_21
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16477..16935
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003639CE2
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AEI46568.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 /
SCNpilot_cont_300_bf_scaffold_992_22
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17192..19180
DNA (1989bp) protein (663aa)
Nitrous-oxide reductase {ECO:0000313|EMBL:AEI46569.1}; EC=1.7.2.4 {ECO:0000313|EMBL:AEI46569.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" sou
nitrous-oxide reductase n=1 Tax=Rudanella lutea RepID=UPI000371225C rbh
nitrous-oxide reductase rbh
SCNpilot_cont_300_bf_scaffold_992_23
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19180..20193
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000379030B rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI46570.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 2953
SCNpilot_cont_300_bf_scaffold_992_24
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20168..21415
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036CE923 rbh
parallel beta-helix repeat-containing protein rbh
Parallel beta-helix repeat protein {ECO:0000313|EMBL:AEI46571.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strai
SCNpilot_cont_300_bf_scaffold_992_25
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21618..22142
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000361AD10
Copper ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC89493.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" sou
ABC transporter
SCNpilot_cont_300_bf_scaffold_992_26
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22151..22918
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000375E1BA rbh
Putative copper ABC transporter permease protein {ECO:0000313|EMBL:GAO42688.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.
nitrous-oxide metabolic protein NosY rbh
SCNpilot_cont_300_bf_scaffold_992_27
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22921..23982
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QR21_SPILD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB37873.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_cont_300_bf_scaffold_992_28
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24140..24841)
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Rudanella lutea RepID=UPI0003658958 rbh
Bacitracin transport ATP-binding protein bcrA {ECO:0000313|EMBL:CCH55103.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma lim
ABC transporter
SCNpilot_cont_300_bf_scaffold_992_29
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24910..25560)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00035DEC4F
Uncharacterized protein {ECO:0000313|EMBL:CCH55102.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_992_30
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25613..27004)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6) RepID=D3VLY9_XENNA
Uncharacterized protein {ECO:0000313|EMBL:KFF22357.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
conserved protein of unknown function
Displaying items 1-30 of 33 in total

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