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SCNpilot_cont_300_bf_scaffold_1756

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1756_1
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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100..1050
DNA (951bp) protein (317aa)
transposase Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Integrase core domain protein id=1744553 bin=GWE2_Spirochaete_31_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
transposase
SCNpilot_cont_300_bf_scaffold_1756_2
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1593..1931)
DNA (339bp) protein (113aa)
Putative membrane protein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0LB05_ZOBGA
Uncharacterized protein {ECO:0000313|EMBL:GAF04350.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1756_3
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1942..2343)
DNA (402bp) protein (134aa)
Permease n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L4H2_ZOBGA
permease
Permease {ECO:0000313|EMBL:CAZ95706.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 1280
SCNpilot_cont_300_bf_scaffold_1756_4
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2340..2975)
DNA (636bp) protein (212aa)
Permease n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L4H2_ZOBGA
Putative permease {ECO:0000313|EMBL:GAF04351.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9
permease
SCNpilot_cont_300_bf_scaffold_1756_5
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3497..3868)
DNA (372bp) protein (124aa)
ArsR-type transcriptional regulator n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0LB04_ZOBGA
ArsR family transcriptional regulator
ArsR-type transcriptional regulator {ECO:0000313|EMBL:CAZ95705.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galac
SCNpilot_cont_300_bf_scaffold_1756_6
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4298..5377
DNA (1080bp) protein (360aa)
Transposase IS66 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C8W8_SPHS2
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:ADZ81437.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium s
SCNpilot_cont_300_bf_scaffold_1756_7
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5337..5849
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00038101F6
Transposase {ECO:0000313|EMBL:CDT33773.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM
transposase
SCNpilot_cont_300_bf_scaffold_1756_8
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6191..6400)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9R8U4_RIEAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR35822.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestif
SCNpilot_cont_300_bf_scaffold_1756_9
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6364..6810)
DNA (447bp) protein (149aa)
Uncharacterized protein n=4 Tax=Riemerella anatipestifer RepID=E4TBJ0_RIEAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD55829.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestife
SCNpilot_cont_300_bf_scaffold_1756_10
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6893..7711)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI000375E64B rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIL45227.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia a
SCNpilot_cont_300_bf_scaffold_1756_11
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7739..8365)
DNA (627bp) protein (209aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae;
Signal peptidase I n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AM66_IGNAJ
Signal peptidase I
SCNpilot_cont_300_bf_scaffold_1756_12
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8362..8928)
DNA (567bp) protein (189aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL45229.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia a
SCNpilot_cont_300_bf_scaffold_1756_13
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8938..10008)
DNA (1071bp) protein (357aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIL45230.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia a
SCNpilot_cont_300_bf_scaffold_1756_14
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10334..10555)
DNA (222bp) protein (74aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL45231.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia a
SCNpilot_cont_300_bf_scaffold_1756_15
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10705..11289)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI00036DB35B
Uncharacterized protein {ECO:0000313|EMBL:KFF16672.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
cyclic nucleotide binding regulatory protein
SCNpilot_cont_300_bf_scaffold_1756_16
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12528..13796
DNA (1269bp) protein (423aa)
Transposase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5H4_FLAB3
transposase
Transposase {ECO:0000313|EMBL:ACU07662.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_300_bf_scaffold_1756_17
unknown

Not on your lists

comp(14043..14552)
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1756_18
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14559..15755)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XNS7_DESHA
Uncharacterized protein {ECO:0000313|EMBL:EHL06573.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense
hypothetical protein
Displaying 18 items

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